RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ALADP13716 330 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 NT5C2P49902 561 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 MRE11P49959 708 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 TRAF1Q13077 416 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 PTK7Q13308 1070 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 PTCRAQ6ISU1 281 aaPredicted RBP8.23□□□□□ -1.09
COL17A1-205ENST00000480127 FAM117BQ6P1L5 589 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 POTEBQ6S5H4 581 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.23□□□□□ -1.09
COL17A1-205ENST00000480127 NFXL1Q6ZNB6 911 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 DGKHQ86XP1 1220 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 HOMER1Q86YM7 354 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 SMC5Q8IY18 1101 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 RGS22Q8NE09 1264 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 NEK9Q8TD19 979 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 NSUN6Q8TEA1 469 aaKnown RBP8.23□□□□□ -1.09
COL17A1-205ENST00000480127 TBC1D5Q92609 795 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 TAAR1Q96RJ0 339 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 DSCC1Q9BVC3 393 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 COL20A1Q9P218 1284 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 U3KPZ7 1027 aaPredicted RBP8.23□□□□□ -1.09
COL17A1-205ENST00000480127 MUC6Q6W4X9 2439 aa8.23□□□□□ -1.09
COL17A1-205ENST00000480127 TRIP12Q14669 1992 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 SIP14410 1827 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 HAS3O00219 553 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 EFCAB14O75071 495 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 MYCLP12524 364 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 EIF2AK2P19525 551 aaKnown RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 CASTP20810 708 aaKnown RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 SSTR3P32745 418 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 PSEN2P49810 448 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 HTRA4P83105 476 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 ZNF200P98182 395 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 NHLH1Q02575 133 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 IKBKEQ14164 716 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 HIC1Q14526 733 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 STXBP2Q15833 593 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 DGKDQ16760 1214 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 PUS10Q3MIT2 529 aaKnown RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 ZNF618Q5T7W0 954 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 CASC1Q6TDU7 716 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 CATIPQ7Z7H3 387 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 ADGRF4Q8IZF3 695 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 FBXO22Q8NEZ5 403 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 SP7Q8TDD2 431 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 SYTL5Q8TDW5 730 aaPredicted RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 PIBF1Q8WXW3 757 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 MRPL38Q96DV4 380 aaKnown RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 RMDN3Q96TC7 470 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 ALG1Q9BT22 464 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 CPVLQ9H3G5 476 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 DDX41Q9UJV9 622 aaKnown RBP8.22□□□□□ -1.09
COL17A1-205ENST00000480127 INSL6Q9Y581 213 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 MRVI1Q9Y6F6 885 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 PIEZO1Q92508 2521 aa8.22□□□□□ -1.09
COL17A1-205ENST00000480127 BRWD1Q9NSI6 2320 aa8.21□□□□□ -1.09
COL17A1-205ENST00000480127 C19orf67A6NJJ6 358 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 H3BQ06 376 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-205ENST00000480127 DCXO43602 365 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 LGR5O75473 907 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 F2P00734 622 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 ZP2Q05996 745 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 MFSD10Q14728 455 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 COL19A1Q14993 1142 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 WTAPQ15007 396 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 CSPP1Q1MSJ5 1256 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 KIAA0753Q2KHM9 967 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 QRICH1Q2TAL8 776 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 EPC2Q52LR7 807 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 DHX37Q8IY37 1157 aaKnown RBP8.21□□□□□ -1.1
COL17A1-205ENST00000480127 C7orf31Q8N865 590 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 ENAHQ8N8S7 591 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-205ENST00000480127 DBF4BQ8NFT6 615 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 CUL5Q93034 780 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 EMID1Q96A84 441 aaPredicted RBP8.21□□□□□ -1.1
COL17A1-205ENST00000480127 UIMC1Q96RL1 719 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 AMNQ9BXJ7 453 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 MAF1Q9H063 256 aa8.21□□□□□ -1.1
COL17A1-205ENST00000480127 SEC63Q9UGP8 760 aaKnown RBP8.21□□□□□ -1.1
COL17A1-205ENST00000480127 KLRF2D3W0D1 207 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 H3BNC9 293 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 NOP56O00567 594 aaKnown RBP8.2□□□□□ -1.1
COL17A1-205ENST00000480127 SORBS3O60504 671 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 AMHP03971 560 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 ZNF286BP0CG31 522 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 HOXD8P13378 290 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-205ENST00000480127 FGD1P98174 961 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 PTPROQ16827 1216 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 PLEKHG4Q58EX7 1191 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 TCEAL5Q5H9L2 206 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 TTC22Q5TAA0 569 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 FCHSD1Q86WN1 690 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 MYOCDQ8IZQ8 938 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 BANK1Q8NDB2 785 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 NCOA7Q8NI08 942 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 PPTC7Q8NI37 304 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 CTCFLQ8NI51 663 aaPredicted RBP8.2□□□□□ -1.1
COL17A1-205ENST00000480127 ANKS1AQ92625 1134 aa8.2□□□□□ -1.1
COL17A1-205ENST00000480127 PABPC5Q96DU9 382 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms