RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 HDAC6Q9UBN7 1215 aa7.74□□□□□ -1.17
FN1-220ENST00000480024 GTF2IRD1Q9UHL9 959 aa7.74□□□□□ -1.17
FN1-220ENST00000480024 RBM8AQ9Y5S9 174 aaKnown RBP7.74□□□□□ -1.17
FN1-220ENST00000480024 REV3LO60673 3130 aa7.74□□□□□ -1.17
FN1-220ENST00000480024 PNMA6FA0A0J9YX94 578 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 PRC1O43663 620 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 SELPP16109 830 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 KCNJ6P48051 423 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 ZNF200P98182 395 aaPredicted RBP7.73□□□□□ -1.17
FN1-220ENST00000480024 TROAPQ12815 778 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 TRAF1Q13077 416 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 KIAA0753Q2KHM9 967 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 HSDL1Q3SXM5 330 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 TJAP1Q5JTD0 557 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 CELF3Q5SZQ8 465 aaKnown RBP7.73□□□□□ -1.17
FN1-220ENST00000480024 CTCFLQ8NI51 663 aaPredicted RBP7.73□□□□□ -1.17
FN1-220ENST00000480024 AFAP1L1Q8TED9 768 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 MAP4K1Q92918 833 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 WNT8BQ93098 351 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 LY9Q9HBG7 655 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 MAP3K20Q9NYL2 800 aaKnown RBP7.73□□□□□ -1.17
FN1-220ENST00000480024 THEGQ9P2T0 379 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 MICAL3Q7RTP6 2002 aa7.73□□□□□ -1.17
FN1-220ENST00000480024 EPOPA6NHQ4 379 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 HAS3O00219 553 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 DDAH1O94760 285 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 BAIAP3O94812 1187 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 ARHGEF15O94989 841 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 CKBP12277 381 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 RXRAP19793 462 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 SP2Q02086 613 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 SP4Q02446 784 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 RBL2Q08999 1139 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 PTK7Q13308 1070 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 COL9A3Q14050 684 aaPredicted RBP7.72□□□□□ -1.17
FN1-220ENST00000480024 GPNMBQ14956 572 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 TCTN1Q2MV58 587 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 MYSM1Q5VVJ2 828 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 KCNV1Q6PIU1 500 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 CASC1Q6TDU7 716 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 NFXL1Q6ZNB6 911 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 TMCO2Q7Z6W1 182 aaPredicted RBP7.72□□□□□ -1.17
FN1-220ENST00000480024 VSIG10LQ86VR7 867 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 RAB11FIP4Q86YS3 637 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 HERC6Q8IVU3 1022 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 ZNF654Q8IZM8 581 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 SAMD3Q8N6K7 520 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 IGDCC4Q8TDY8 1250 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 SYMPKQ92797 1274 aaKnown RBP7.72□□□□□ -1.17
FN1-220ENST00000480024 RRP36Q96EU6 259 aaKnown RBP7.72□□□□□ -1.17
FN1-220ENST00000480024 SPZ1Q9BXG8 430 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 MLXIPQ9HAP2 919 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 SEC63Q9UGP8 760 aaKnown RBP7.72□□□□□ -1.17
FN1-220ENST00000480024 FRMPD4Q14CM0 1322 aa7.72□□□□□ -1.17
FN1-220ENST00000480024 CCDC69A6NI79 296 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 RFXAPO00287 272 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 NOP56O00567 594 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 SH2B2O14492 632 aaPredicted RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 TLL1O43897 1013 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 NBNO60934 754 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 PLEKHA8P1O95397 391 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 LGALS2P05162 132 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 HOXD8P13378 290 aaPredicted RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 KIF5BP33176 963 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 WDR5P61964 334 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 DEFB103AP81534 67 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 MRPS9P82933 396 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 TAP1Q03518 808 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 HIC1Q14526 733 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 TRIM71Q2Q1W2 868 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 GNPTABQ3T906 1256 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 CNKSR3Q6P9H4 555 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 USP17L6PQ6QN14 398 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 SPRED2Q7Z698 418 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 SKAP1Q86WV1 359 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 TRIM50Q86XT4 487 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 CMTR1Q8N1G2 835 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 SMARCC2Q8TAQ2 1214 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 PHOSPHO2Q8TCD6 241 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 ARNTL2Q8WYA1 636 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 INPP4AQ96PE3 977 aaPredicted RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 C16orf70Q9BSU1 422 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 LRRC2Q9BYS8 371 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 LSG1Q9H089 658 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 BCAS3Q9H6U6 928 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 ANO2Q9NQ90 1003 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 RTEL1Q9NZ71 1219 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 TCF20Q9UGU0 1960 aaKnown RBP7.71□□□□□ -1.18
FN1-220ENST00000480024 KAT6AQ92794 2004 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 SIP14410 1827 aa7.71□□□□□ -1.18
FN1-220ENST00000480024 hCG_1642624A0A1W2PR95 340 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 C17orf102A2RUQ5 167 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 LCHNA4D1U4 455 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 KIF28PB7ZC32 967 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 H3BRB1 525 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 SLC27A2O14975 620 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 FIBPO43427 364 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 GTPBP6O43824 516 aaPredicted RBP7.7□□□□□ -1.18
FN1-220ENST00000480024 PPFIA4O75335 1185 aa7.7□□□□□ -1.18
FN1-220ENST00000480024 PARNO95453 639 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms