RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 GOLGA8HP0CJ92 632 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 SCG2P13521 617 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 FOSL2P15408 326 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 ADD1P35611 737 aaKnown RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 ALDH5A1P51649 535 aaPredicted RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 PURAQ00577 322 aaKnown RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 ST3GAL1Q11201 340 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 PKN1Q16512 942 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 FBXO11Q86XK2 927 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 FBXO16Q8IX29 292 aaPredicted RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 NSUN7Q8NE18 718 aaKnown RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 CCDC148Q8NFR7 591 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 DNERQ8NFT8 737 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 TMX3Q96JJ7 454 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 MYL10Q9BUA6 226 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 WDR11Q9BZH6 1224 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 ZMYND12Q9H0C1 365 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 GPCPD1Q9NPB8 672 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 FRMPD2Q68DX3 1309 aaPredicted RBP10.24□□□□□ -0.77
DDX56-211ENST00000479602 REV3LO60673 3130 aa10.24□□□□□ -0.77
DDX56-211ENST00000479602 K7ELQ4 463 aaPredicted RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 OPLAHO14841 1288 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 ZEB2O60315 1214 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 PPP1R11O60927 126 aaPredicted RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 CD2BP2O95400 341 aaKnown RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 LARGE1O95461 756 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 CTDNEP1O95476 244 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 POU3F3P20264 500 aaPredicted RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 PSMC6P62333 389 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 RPS6P62753 249 aaKnown RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 IKQ13123 557 aaPredicted RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 AP3B2Q13367 1082 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 GPNMBQ14956 572 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 NSMFQ6X4W1 530 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 EEPD1Q7L9B9 569 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 VTI1AQ96AJ9 217 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 CTAGE1Q96RT6 745 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 PIGSQ96S52 555 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 PPP1R12CQ9BZL4 782 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 UBA5Q9GZZ9 404 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 AP5M1Q9H0R1 490 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 HIPK3Q9H422 1215 aa10.23□□□□□ -0.77
DDX56-211ENST00000479602 ADD3Q9UEY8 706 aaKnown RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 YBX2Q9Y2T7 364 aaKnown RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.23□□□□□ -0.77
DDX56-211ENST00000479602 XRRA1Q6P2D8 792 aa10.22□□□□□ -0.77
DDX56-211ENST00000479602 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
DDX56-211ENST00000479602 TBC1D5Q92609 795 aa10.22□□□□□ -0.77
DDX56-211ENST00000479602 TRMT13Q9NUP7 481 aaKnown RBP10.22□□□□□ -0.77
DDX56-211ENST00000479602 PCDHA1Q9Y5I3 950 aa10.22□□□□□ -0.77
DDX56-211ENST00000479602 SCN10AQ9Y5Y9 1956 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 PRRC2BQ5JSZ5 2229 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 PTPDC1A2A3K4 754 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 STXBP3O00186 592 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 NKRFO15226 690 aaKnown RBP eCLIP10.21□□□□□ -0.77
DDX56-211ENST00000479602 STAM2O75886 525 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 ARIH2O95376 493 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 FOSP01100 380 aaPredicted RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 SUPT20HL2P0C7V6 817 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 FDPSP14324 419 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 XBP1P17861 261 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 RXRAP19793 462 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 CALML3P27482 149 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 GNA11P29992 359 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 CLK2P49760 499 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 CCL23P55773 120 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 AKAP17AQ02040 695 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 PTPN11Q06124 597 aaPredicted RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 WWC2Q6AWC2 1192 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 NFRKBQ6P4R8 1299 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 RNF207Q6ZRF8 634 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 NOL8Q76FK4 1167 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 RPUSD2Q8IZ73 545 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 BICD2Q8TD16 824 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 CRYGNQ8WXF5 182 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 IWS1Q96ST2 819 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 NCOA5Q9HCD5 579 aaKnown RBP10.21□□□□□ -0.77
DDX56-211ENST00000479602 RIC8AQ9NPQ8 531 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 PRDM6Q9NQX0 595 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 POLR3EQ9NVU0 708 aa10.21□□□□□ -0.77
DDX56-211ENST00000479602 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.78
DDX56-211ENST00000479602 M0R2N6 131 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 PITPNM1O00562 1244 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 MEIS2O14770 477 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 KPNA6O60684 536 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 PFKMP08237 780 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 CYP2C9P11712 490 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 PDCP20941 246 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 CPT1AP50416 773 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 MRPL12P52815 198 aaKnown RBP10.2□□□□□ -0.78
DDX56-211ENST00000479602 TTLL4Q14679 1199 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 NPY5RQ15761 445 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 RAB30Q15771 203 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 NBPF20Q3BBV1 942 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 TJAP1Q5JTD0 557 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 OTOP2Q7RTS6 562 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 SESTD1Q86VW0 696 aa10.2□□□□□ -0.78
DDX56-211ENST00000479602 SYTL5Q8TDW5 730 aaPredicted RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms