RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 ZNF772Q68DY9 489 aaPredicted RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 FGFR2P21802 821 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 HOXA13P31271 388 aaPredicted RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 PRR5LQ6MZQ0 368 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 BCAS4Q8TDM0 211 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 DPF2Q92785 391 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 NACC1Q96RE7 527 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 NHEJ1Q9H9Q4 299 aaPredicted RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 TMEM260Q9NX78 707 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 N4BP1O75113 896 aaKnown RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 LIG3P49916 1009 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 EHHADHQ08426 723 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 PTPROQ16827 1216 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 SP8Q8IXZ3 490 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 PPFIBP2Q8ND30 876 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 CCDC127Q96BQ5 260 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 CPSF2Q9P2I0 782 aaKnown RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 USP17L10C9JJH3 530 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 BUB1BO60566 1050 aaPredicted RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 AFPP02771 609 aaKnown RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 PCK1P35558 622 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 EIF4A3P38919 411 aaKnown RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 ST3GAL1Q11201 340 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 TOGARAM2Q6ZUX3 1019 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 TDRD3Q9H7E2 651 aaKnown RBP15.69■□□□□ 0.1
COL20A1-206ENST00000479501 CAPN7Q9Y6W3 813 aa15.69■□□□□ 0.1
COL20A1-206ENST00000479501 SNAP25P60880 206 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 AP3B2Q13367 1082 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 CCDC93Q567U6 631 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 FAM186BQ8IYM0 893 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 DCAF4Q8WV16 495 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 CLIC2O15247 247 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 INTS8Q75QN2 995 aaKnown RBP15.68■□□□□ 0.1
COL20A1-206ENST00000479501 TBC1D16Q8TBP0 767 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 SPZ1Q9BXG8 430 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 BHMT2Q9H2M3 363 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 PDE11AQ9HCR9 933 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 NKIRAS1Q9NYS0 192 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 PVALEFA0A1B0GWK0 134 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 AKR1B1P15121 316 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 PSMC2P35998 433 aaKnown RBP15.68■□□□□ 0.1
COL20A1-206ENST00000479501 ORC2Q13416 577 aaPredicted RBP15.68■□□□□ 0.1
COL20A1-206ENST00000479501 ANAPC4Q9UJX5 808 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 NWD1Q149M9 1564 aa15.68■□□□□ 0.1
COL20A1-206ENST00000479501 RXRBP28702 533 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 ALDH3A1P30838 453 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 GNGT1P63211 74 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 MIGA2Q7L4E1 593 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 PPM1KQ8N3J5 372 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 MED4Q9NPJ6 270 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 JCADQ9P266 1359 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 SARNPP82979 210 aaKnown RBP15.67■□□□□ 0.1
COL20A1-206ENST00000479501 ATP11AP98196 1134 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 ZNF365Q70YC5 407 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 DEPTORQ8TB45 409 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 MYCBPQ99417 103 aaPredicted RBP15.67■□□□□ 0.1
COL20A1-206ENST00000479501 HINFPQ9BQA5 517 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 ABHD10Q9NUJ1 306 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 BAIAP2L1Q9UHR4 511 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 CNTNAP4Q9C0A0 1308 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 CCDC151A5D8V7 595 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 E7EVH7 732 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 SEC31AO94979 1220 aaKnown RBP15.67■□□□□ 0.1
COL20A1-206ENST00000479501 TROAPQ12815 778 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 CLUL1Q15846 466 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 LONRF2Q1L5Z9 754 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 AK9Q5TCS8 1911 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 KRIT1O00522 736 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 ATP8B1O43520 1251 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 TRIM7Q9C029 511 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 PCDHA6Q9UN73 950 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 PCDHA8Q9Y5H6 950 aa15.67■□□□□ 0.1
COL20A1-206ENST00000479501 CCDC105Q8IYK2 499 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 GLG1Q92896 1179 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 PARD6BQ9BYG5 372 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 C21orf2O43822 256 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 PPP1R18Q6NYC8 613 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 FBXO38Q6PIJ6 1188 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 SUGT1Q9Y2Z0 365 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 FERP16591 822 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 CDAN1Q8IWY9 1227 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 CRAMP1Q96RY5 1269 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 PPP1R12CQ9BZL4 782 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 CCSER1Q9C0I3 900 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 ASIC3Q9UHC3 531 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 DAGLAQ9Y4D2 1042 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 ECM2O94769 699 aaPredicted RBP15.66■□□□□ 0.1
COL20A1-206ENST00000479501 TDP2O95551 362 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 CLCN6P51797 869 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 GUCY2FP51841 1108 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 KIF11P52732 1056 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 FMR1Q06787 632 aaKnown RBP eCLIP15.66■□□□□ 0.1
COL20A1-206ENST00000479501 FAM160B2Q86V87 743 aa15.66■□□□□ 0.1
COL20A1-206ENST00000479501 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms