RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SLCO6A1Q86UG4 719 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 JAZF1Q86VZ6 243 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 CPNE8Q86YQ8 564 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 SCUBE1Q8IWY4 988 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 EXOC2Q96KP1 924 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 JMJD8Q96S16 334 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 MMP19Q99542 508 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 PDGFDQ9GZP0 370 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-207ENST00000478913 GPR160Q9UJ42 338 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 MRPL42Q9Y6G3 142 aaKnown RBP7.33□□□□□ -1.24
CCDC171-207ENST00000478913 AHDC1Q5TGY3 1603 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 A0A1W2PQ27 194 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 A0A1W2PQ64 194 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 A0A1W2PQC6 194 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 A0A1W2PQD8 194 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 PLEKHD1A6NEE1 506 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 WTIPA6NIX2 430 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 NRDCO43847 1150 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 L1CAMP32004 1257 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 TRHRP34981 398 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 IRAK1P51617 712 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 SUMO1P63165 101 aaKnown RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 KCNAB2Q13303 367 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 IQCEQ6IPM2 695 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 GALNT18Q6P9A2 607 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 GIMAP6Q6P9H5 292 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 USP53Q70EK8 1073 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 FAM9AQ8IZU1 332 aaPredicted RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 KREMEN2Q8NCW0 462 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 ABHD4Q8TB40 342 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 DIO2Q92813 273 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 RNPC3Q96LT9 517 aaKnown RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 DHRS4Q9BTZ2 278 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 C19orf44Q9H6X5 657 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 TMA7Q9Y2S6 64 aaKnown RBP7.32□□□□□ -1.24
CCDC171-207ENST00000478913 NRKQ7Z2Y5 1582 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 KIAA1210Q9ULL0 1709 aa7.32□□□□□ -1.24
CCDC171-207ENST00000478913 TIGD5Q53EQ6 642 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 EFCAB2Q5VUJ9 269 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 KIRREL1Q96J84 757 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 SETD5Q9C0A6 1442 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 SP110Q9HB58 689 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 IMPACTQ9P2X3 320 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 TMEFF2Q9UIK5 374 aaPredicted RBP7.31□□□□□ -1.24
CCDC171-207ENST00000478913 MRPS23Q9Y3D9 190 aaKnown RBP7.31□□□□□ -1.24
CCDC171-207ENST00000478913 ITSN2Q9NZM3 1697 aa7.31□□□□□ -1.24
CCDC171-207ENST00000478913 UGGT1Q9NYU2 1555 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 CCDC163A0A0D9SF12 145 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 NPHS1O60500 1241 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 PSPNO60542 156 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 TOMM70O94826 608 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 ATF3P18847 181 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 LTBRP36941 435 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 SQSTM1Q13501 440 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 DENND5AQ6IQ26 1287 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 NUP43Q8NFH3 380 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 PLCD4Q9BRC7 762 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 TMEM260Q9NX78 707 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 TBX22Q9Y458 520 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 RNF114Q9Y508 228 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 CLTCQ00610 1675 aaKnown RBP7.3□□□□□ -1.24
CCDC171-207ENST00000478913 ATP7AQ04656 1500 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 CARMIL1Q5VZK9 1371 aa7.3□□□□□ -1.24
CCDC171-207ENST00000478913 TNRC18O15417 2968 aaPredicted RBP7.29□□□□□ -1.24
CCDC171-207ENST00000478913 REREQ9P2R6 1566 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 A0A0C4DFX4 3053 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 UGGT2Q9NYU1 1516 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 ESYT3A0FGR9 886 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 BLACEA4D250 179 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 NOTOA8MTQ0 251 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 RBM10P98175 930 aaKnown RBP7.29□□□□□ -1.24
CCDC171-207ENST00000478913 SNX17Q15036 470 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 TESK1Q15569 626 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 NTRK3Q16288 839 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 INF2Q27J81 1249 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 FYB2Q5VWT5 728 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 MBLAC2Q68D91 279 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 CCDC103Q8IW40 242 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 DCAF4Q8WV16 495 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 KISS1RQ969F8 398 aaPredicted RBP7.29□□□□□ -1.24
CCDC171-207ENST00000478913 ZNF518AQ6AHZ1 1483 aa7.29□□□□□ -1.24
CCDC171-207ENST00000478913 TLDC2A0PJX2 215 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 C7orf72A4D263 438 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 FOXN1O15353 648 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 MYO1BO43795 1136 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 PRKCAP17252 672 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 CORO7P57737 925 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 JAG1P78504 1218 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 KCNMB1Q16558 191 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 NLRX1Q86UT6 975 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 ZSWIM9Q86XI8 627 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 HOMER1Q86YM7 354 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 APPBP2Q92624 585 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 RNF32Q9H0A6 362 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 NPFFR2Q9Y5X5 522 aa7.28□□□□□ -1.24
CCDC171-207ENST00000478913 GOLGB1Q14789 3259 aaKnown RBP7.28□□□□□ -1.24
CCDC171-207ENST00000478913 DLC1Q96QB1 1528 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 A0A1W2PQJ5 194 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 PAPLNO95428 1278 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms