RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 BMP3P12645 472 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 TRIM27P14373 513 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 ITPKAP23677 461 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 GSTO1P78417 241 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 PCDH1Q08174 1060 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 PPIL2Q13356 520 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 SNAPC2Q13487 334 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 MTX1Q13505 466 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 MVPQ14764 893 aaKnown RBP7.73□□□□□ -1.17
HOXB3-209ENST00000478644 ZKSCAN2Q63HK3 967 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 FDX2Q6P4F2 183 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 OPTNQ96CV9 577 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 TEPSINQ96N21 525 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 DBNDD2Q9BQY9 259 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 CYP4F12Q9HCS2 524 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 LAMB1P07942 1786 aa7.73□□□□□ -1.17
HOXB3-209ENST00000478644 ARAP2Q8WZ64 1704 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 A0A1B0GUL6 1792 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 HMX2A2RU54 273 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 TCP10L2B9ZVM9 353 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 SNAP23O00161 211 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 GPR182O15218 404 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 ENTPD3O75355 529 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 RFX5P48382 616 aaPredicted RBP7.72□□□□□ -1.17
HOXB3-209ENST00000478644 CHAF1AQ13111 956 aaPredicted RBP7.72□□□□□ -1.17
HOXB3-209ENST00000478644 ORC1Q13415 861 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 ATP2B3Q16720 1220 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 SPRED3Q2MJR0 410 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 APOBEC3HQ6NTF7 200 aaKnown RBP7.72□□□□□ -1.17
HOXB3-209ENST00000478644 FASTKD5Q7L8L6 764 aaKnown RBP7.72□□□□□ -1.17
HOXB3-209ENST00000478644 CERS3Q8IU89 383 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 DMRTB1Q96MA1 342 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 IDI2Q9BXS1 227 aa7.72□□□□□ -1.17
HOXB3-209ENST00000478644 CCL15-CCL14A0A0B4J2E2 113 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 SOWAHDA6NJG2 315 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 KIAA1324LA8MWY0 1029 aaPredicted RBP7.71□□□□□ -1.18
HOXB3-209ENST00000478644 CXCL11O14625 94 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 TLR2O60603 784 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 B3GALT4O96024 378 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 GNAI2P04899 355 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 UQCRFS1P1P0C7P4 283 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 GSTM4Q03013 218 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 VGLL4Q14135 290 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 TAF1CQ15572 869 aaPredicted RBP7.71□□□□□ -1.18
HOXB3-209ENST00000478644 CCL15Q16663 113 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 NOL9Q5SY16 702 aaKnown RBP7.71□□□□□ -1.18
HOXB3-209ENST00000478644 BEND4Q6ZU67 534 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 ATG9AQ7Z3C6 839 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 ANKRD23Q86SG2 305 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 FRAT1Q92837 279 aaPredicted RBP7.71□□□□□ -1.18
HOXB3-209ENST00000478644 WRNIP1Q96S55 665 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 TMEM39BQ9GZU3 492 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 CHMP4BQ9H444 224 aaKnown RBP7.71□□□□□ -1.18
HOXB3-209ENST00000478644 ZNF112Q9UJU3 913 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 SCAF8Q9UPN6 1271 aaKnown RBP7.71□□□□□ -1.18
HOXB3-209ENST00000478644 PTPN22Q9Y2R2 807 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 SLC45A1Q9Y2W3 748 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
HOXB3-209ENST00000478644 PRR19A6NJB7 356 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 IGF2BP3O00425 579 aaKnown RBP eCLIP7.7□□□□□ -1.18
HOXB3-209ENST00000478644 EIF1AYO14602 144 aaKnown RBP7.7□□□□□ -1.18
HOXB3-209ENST00000478644 SRGAP3O43295 1099 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 COBLO75128 1261 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 G3BP1Q13283 466 aaKnown RBP eCLIP7.7□□□□□ -1.18
HOXB3-209ENST00000478644 CRHR2Q13324 411 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 GORABQ5T7V8 394 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 OTOP1Q7RTM1 612 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 DZIP1Q86YF9 867 aaKnown RBP7.7□□□□□ -1.18
HOXB3-209ENST00000478644 CCDC74AQ96AQ1 378 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 ARMC5Q96C12 935 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 CLMNQ96JQ2 1002 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 NOL10Q9BSC4 688 aaKnown RBP7.7□□□□□ -1.18
HOXB3-209ENST00000478644 USP26Q9BXU7 913 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 KRTAP4-8Q9BYQ9 185 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 ZNF576Q9H609 170 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 ZFYVE1Q9HBF4 777 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 GPR108Q9NPR9 543 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 GINM1Q9NU53 330 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 USP40Q9NVE5 1235 aa7.7□□□□□ -1.18
HOXB3-209ENST00000478644 SSC5DA1L4H1 1573 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 CTNND1O60716 968 aaKnown RBP7.69□□□□□ -1.18
HOXB3-209ENST00000478644 MED26O95402 600 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 BAG3O95817 575 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 CYP11A1P05108 521 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 PABPC4Q13310 644 aaKnown RBP eCLIP7.69□□□□□ -1.18
HOXB3-209ENST00000478644 CCDC158Q5M9N0 1113 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 TMEM57Q8N5G2 664 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 C12orf50Q8NA57 414 aaPredicted RBP7.69□□□□□ -1.18
HOXB3-209ENST00000478644 MEIS3Q99687 375 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 PTPN18Q99952 460 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 NIF3L1Q9GZT8 377 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 DHX36Q9H2U1 1008 aaKnown RBP7.69□□□□□ -1.18
HOXB3-209ENST00000478644 NPHS2Q9NP85 383 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 RCAN3Q9UKA8 241 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 TNNQ9UQP3 1299 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 JAG2Q9Y219 1238 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 DAGLAQ9Y4D2 1042 aa7.69□□□□□ -1.18
HOXB3-209ENST00000478644 LRRFIP2Q9Y608 721 aaKnown RBP7.69□□□□□ -1.18
HOXB3-209ENST00000478644 SYNGAP1Q96PV0 1343 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms