RNA–Protein interactions for RNA: ENST00000478451.1

GPNMB-210, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 862 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-210ENST00000478451 GTF2IRD2Q86UP8 949 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 NLGN2Q8NFZ4 835 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 MICAL1Q8TDZ2 1067 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 HNRNPLLQ8WVV9 542 aaKnown RBP5.59□□□□□ -1.51
GPNMB-210ENST00000478451 MRGPRX3Q96LB0 322 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 CLEC1BQ9P126 229 aa5.59□□□□□ -1.51
GPNMB-210ENST00000478451 CNOT6Q9ULM6 557 aaKnown RBP5.59□□□□□ -1.51
GPNMB-210ENST00000478451 DUOX2Q9NRD8 1548 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 ATP10BO94823 1461 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 CCDC144AA2RUR9 1427 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 LRPPRCP42704 1394 aaKnown RBP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 RNF123Q5XPI4 1314 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 ZNF644Q9H582 1327 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 NPHP3-ACAD11A0A0J9YXS1 232 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 RFXAPO00287 272 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 N4BP3O15049 544 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 GTF2F1P35269 517 aaKnown RBP eCLIP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 IRX6P78412 446 aaPredicted RBP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 SSPNQ14714 243 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 SV2CQ496J9 727 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 ZC3H14Q6PJT7 736 aaKnown RBP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 PAQR3Q6TCH7 311 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 CPNE8Q86YQ8 564 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 MZB1Q8WU39 189 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 BTN2A2Q8WVV5 523 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 COPS5Q92905 334 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 CCDC136Q96JN2 1154 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 SIGLEC10Q96LC7 697 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 CARD11Q9BXL7 1154 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 NKX2-4Q9H2Z4 354 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 R3HCC1Q9Y3T6 440 aaKnown RBP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 RWDD3Q9Y3V2 267 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 KCTD3Q9Y597 815 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 IRAK3Q9Y616 596 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 KDM5AP29375 1690 aaKnown RBP5.58□□□□□ -1.52
GPNMB-210ENST00000478451 ARHGAP5Q13017 1502 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 KIF1BO60333 1816 aa5.58□□□□□ -1.52
GPNMB-210ENST00000478451 IRS4O14654 1257 aaPredicted RBP5.57□□□□□ -1.52
GPNMB-210ENST00000478451 TBX1O43435 398 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 GJB6O95452 261 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 ITGAVP06756 1048 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 THBDP07204 575 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 PLS3P13797 630 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 PI3P19957 117 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 ZNF385BQ569K4 471 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 LDHDQ86WU2 507 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 ZNF227Q86WZ6 799 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 LZTR1Q8N653 840 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 BORCS6Q96GS4 357 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 DNAJC2Q99543 621 aaKnown RBP5.57□□□□□ -1.52
GPNMB-210ENST00000478451 GPRC5CQ9NQ84 441 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 CYP26B1Q9NR63 512 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 LRP2BPQ9P2M1 347 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 GULP1Q9UBP9 304 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 SYNMO15061 1565 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 SYCP2Q9BX26 1530 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 ATP10AO60312 1499 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 MAGI2Q86UL8 1455 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 PRAG1Q86YV5 1406 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 ERBINQ96RT1 1412 aa5.57□□□□□ -1.52
GPNMB-210ENST00000478451 TTC37Q6PGP7 1564 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 C7orf72A4D263 438 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 NPHS1O60500 1241 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 GLI4P10075 376 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 ZNF200P98182 395 aaPredicted RBP5.56□□□□□ -1.52
GPNMB-210ENST00000478451 MBLAC2Q68D91 279 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 ANKS3Q6ZW76 656 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 EEPD1Q7L9B9 569 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 CABP7Q86V35 215 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 CELF2-AS1Q8N7Q2 184 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 MMP19Q99542 508 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 IRF2BPLQ9H1B7 796 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 FBLN5Q9UBX5 448 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 NOP58Q9Y2X3 529 aaKnown RBP5.56□□□□□ -1.52
GPNMB-210ENST00000478451 PCDHA5Q9Y5H7 936 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 HCFC2Q9Y5Z7 792 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 TET3O43151 1660 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 DEPDC5O75140 1603 aa5.56□□□□□ -1.52
GPNMB-210ENST00000478451 GPRASP1Q5JY77 1395 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 NEURL4Q96JN8 1562 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 CLASP1Q7Z460 1538 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 ARAP3Q8WWN8 1544 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 ABCC2Q92887 1545 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 ZC3H12DA2A288 527 aaKnown RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 F8W031 263 aaPredicted RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 FOXD2O60548 495 aaPredicted RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 SNRPB2P08579 225 aaKnown RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 NCKAP1LP55160 1127 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 RBM10P98175 930 aaKnown RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 CYP4F3Q08477 520 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 CCDC184Q52MB2 194 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 IGDCC3Q8IVU1 814 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 NPLOC4Q8TAT6 608 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 PNISRQ8TF01 805 aaKnown RBP5.55□□□□□ -1.52
GPNMB-210ENST00000478451 FRS2Q8WU20 508 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 POLR3GLQ9BT43 218 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 MTA3Q9BTC8 594 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 EPN3Q9H201 632 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 TMPRSS5Q9H3S3 457 aa5.55□□□□□ -1.52
GPNMB-210ENST00000478451 DBR1Q9UK59 544 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms