RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 FAM53CQ9NYF3 392 aa5.92□□□□□ -1.46
NECTIN3-204ENST00000478327 MAPRE3Q9UPY8 281 aa5.92□□□□□ -1.46
NECTIN3-204ENST00000478327 NUB1Q9Y5A7 615 aa5.92□□□□□ -1.46
NECTIN3-204ENST00000478327 TNPO3Q9Y5L0 923 aaKnown RBP5.92□□□□□ -1.46
NECTIN3-204ENST00000478327 OR14I1A6ND48 311 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 MAFKO60675 156 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 ZBTB7AO95365 584 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 CKMP06732 381 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 TACR1P25103 407 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 SOX5P35711 763 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 YBX1P67809 324 aaKnown RBP5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 SLC9A5Q14940 896 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 UBE2R2Q712K3 238 aaPredicted RBP5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 KRT26Q7Z3Y9 468 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 PHOSPHO1Q8TCT1 267 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 DDX1Q92499 740 aaKnown RBP5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 FAM168AQ92567 244 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 AP5M1Q9H0R1 490 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 SLC6A20Q9NP91 592 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 KLHL42Q9P2K6 505 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 PPARGC1AQ9UBK2 798 aaKnown RBP5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 FBLN5Q9UBX5 448 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 ZNF652Q9Y2D9 606 aa5.91□□□□□ -1.46
NECTIN3-204ENST00000478327 A0A087X0B3 334 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 GSG1L2A8MUP6 293 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 KRIT1O00522 736 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 NTRK1P04629 796 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 GNAT1P11488 350 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 KCNA6P17658 529 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 MAPKAPK2P49137 400 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 ST5P78524 1137 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 LACTBP83111 547 aaPredicted RBP5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 OTOP3Q7RTS5 596 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 FERMT3Q86UX7 667 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 KIF18BQ86Y91 864 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 SIRT2Q8IXJ6 389 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 TSPAN17Q96FV3 270 aa5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 PDGFDQ9GZP0 370 aaPredicted RBP5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 DDX56Q9NY93 547 aaKnown RBP5.9□□□□□ -1.46
NECTIN3-204ENST00000478327 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 HGSO14964 777 aaPredicted RBP5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 TADA3O75528 432 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 PDE6BP35913 854 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 STAT3P40763 770 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 AMPD3Q01432 767 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 GPR19Q15760 415 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 ADGRF1Q5T601 910 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 CNNM4Q6P4Q7 775 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 THNSL2Q86YJ6 484 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 UHMK1Q8TAS1 419 aaKnown RBP5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 CCDC136Q96JN2 1154 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 TARS2Q9BW92 718 aaKnown RBP5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 SMOC1Q9H4F8 434 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 ZNF552Q9H707 407 aaPredicted RBP5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 CAAP1Q9H8G2 361 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 HOMER2Q9NSB8 354 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 MCM8Q9UJA3 840 aa5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 G3BP2Q9UN86 482 aaKnown RBP5.89□□□□□ -1.47
NECTIN3-204ENST00000478327 CCDC66A2RUB6 948 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 FAM83GA6ND36 823 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 ZNF503-AS2A6NEH8 195 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 PDE8AO60658 829 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 PEX10O60683 326 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 JMJD7P0C870 316 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 SRGAP2CP0DJJ0 459 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 PYGMP11217 842 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 CPEP16870 476 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 GALK1P51570 392 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 NFKB2Q00653 900 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 ZNF460Q14592 562 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 RAB3GAP1Q15042 981 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 CRY1Q16526 586 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 ARHGAP44Q17R89 818 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 CFAP100Q494V2 611 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 TMEM177Q53S58 311 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 HSP90AB2PQ58FF8 381 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 STEAP3Q658P3 488 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 CDCA2Q69YH5 1023 aaPredicted RBP5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 ABHD17CQ6PCB6 329 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 RPTNQ6XPR3 784 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 ATL2Q8NHH9 583 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 JAM3Q9BX67 310 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 KRTAP9-2Q9BYQ4 174 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 SAMD15Q9P1V8 674 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 KLHL14Q9P2G3 628 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 ARID4BQ4LE39 1312 aaPredicted RBP5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 CARMIL2Q6F5E8 1435 aa5.88□□□□□ -1.47
NECTIN3-204ENST00000478327 F8W031 263 aaPredicted RBP5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 ZNF561-AS1K7EIQ3 104 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 MECP2P51608 486 aaKnown RBP5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 PLEKHN1Q494U1 663 aaPredicted RBP5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 FIGNQ5HY92 759 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 ZC3H14Q6PJT7 736 aaKnown RBP5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 OVCH1Q7RTY7 1134 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 RNF180Q86T96 592 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 TRIM48Q8IWZ4 208 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 NLGN4XQ8N0W4 816 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 IGSF22Q8N9C0 903 aa5.87□□□□□ -1.47
NECTIN3-204ENST00000478327 PIP4K2CQ8TBX8 421 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms