RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 SEMA3FQ13275 785 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 LAMC2Q13753 1193 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 PKN1Q16512 942 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 EMID1Q96A84 441 aaPredicted RBP26.09■■□□□ 1.77
TRAF4-211ENST00000478021 SLC26A6Q9BXS9 759 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 BCAS3Q9H6U6 928 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 B4GALT4O60513 344 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 AKAP17AQ02040 695 aaKnown RBP26.08■■□□□ 1.77
TRAF4-211ENST00000478021 NBPF20Q3BBV1 942 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 FAM47CQ5HY64 1035 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 CELF3Q5SZQ8 465 aaKnown RBP26.08■■□□□ 1.77
TRAF4-211ENST00000478021 MYSM1Q5VVJ2 828 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 TDHQ8IZJ6 230 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 PPP1R12CQ9BZL4 782 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 TRPV6Q9H1D0 765 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 TMEM260Q9NX78 707 aa26.08■■□□□ 1.77
TRAF4-211ENST00000478021 TGFB3P10600 412 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 IFNAR1P17181 557 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 ICAM3P32942 547 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 XRRA1Q6P2D8 792 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 PPTC7Q8NI37 304 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 ZNF274Q96GC6 653 aaPredicted RBP26.07■■□□□ 1.76
TRAF4-211ENST00000478021 SPATA33Q96N06 139 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 ALDH8A1Q9H2A2 487 aaPredicted RBP26.07■■□□□ 1.76
TRAF4-211ENST00000478021 MLXIPQ9HAP2 919 aa26.07■■□□□ 1.76
TRAF4-211ENST00000478021 SPATA31C2B4DYI2 1134 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 FIBPO43427 364 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 ZNF286BP0CG31 522 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 DGKDQ16760 1214 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 HSDL1Q3SXM5 330 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 NLRX1Q86UT6 975 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 RNF26Q9BY78 433 aaPredicted RBP26.06■■□□□ 1.76
TRAF4-211ENST00000478021 EHMT1Q9H9B1 1298 aa26.06■■□□□ 1.76
TRAF4-211ENST00000478021 EIF5BO60841 1220 aaKnown RBP26.05■■□□□ 1.76
TRAF4-211ENST00000478021 KAT2BQ92831 832 aa26.05■■□□□ 1.76
TRAF4-211ENST00000478021 SEZ6LQ9BYH1 1024 aa26.05■■□□□ 1.76
TRAF4-211ENST00000478021 ANO3Q9BYT9 981 aa26.05■■□□□ 1.76
TRAF4-211ENST00000478021 TRMT13Q9NUP7 481 aaKnown RBP26.05■■□□□ 1.76
TRAF4-211ENST00000478021 SOX1O00570 391 aaPredicted RBP26.04■■□□□ 1.76
TRAF4-211ENST00000478021 CPLX1O14810 134 aa26.04■■□□□ 1.76
TRAF4-211ENST00000478021 ADAMTS3O15072 1205 aa26.04■■□□□ 1.76
TRAF4-211ENST00000478021 TIMP1P01033 207 aa26.04■■□□□ 1.76
TRAF4-211ENST00000478021 C8orf34Q49A92 452 aa26.04■■□□□ 1.76
TRAF4-211ENST00000478021 ITGB5P18084 799 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 CYP2C18P33260 490 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 CLK2P49760 499 aaKnown RBP26.03■■□□□ 1.76
TRAF4-211ENST00000478021 AK2P54819 239 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 FPGSQ05932 587 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 JAKMIP3Q5VZ66 844 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 CYFIP1Q7L576 1253 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 ALG1Q9BT22 464 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 PKD2L1Q9P0L9 805 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 VPS54Q9P1Q0 977 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 TPCN1Q9ULQ1 816 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 UBIAD1Q9Y5Z9 338 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 UMODL1Q5DID0 1318 aa26.03■■□□□ 1.76
TRAF4-211ENST00000478021 RANBP2P49792 3224 aaKnown RBP26.02■■□□□ 1.76
TRAF4-211ENST00000478021 FOSP01100 380 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-211ENST00000478021 CYP2C9P11712 490 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 EPHB4P54760 987 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 SP4Q02446 784 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 SSRP1Q08945 709 aaKnown RBP26.02■■□□□ 1.76
TRAF4-211ENST00000478021 NEDD9Q14511 834 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 C9orf50Q5SZB4 431 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 NFRKBQ6P4R8 1299 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 CCDC12Q8WUD4 166 aaPredicted RBP26.02■■□□□ 1.76
TRAF4-211ENST00000478021 GPRASP2Q96D09 838 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 ZMYND12Q9H0C1 365 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 GLT8D2Q9H1C3 349 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 HIPK3Q9H422 1215 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 TELO2Q9Y4R8 837 aa26.02■■□□□ 1.76
TRAF4-211ENST00000478021 ESYT2A0FGR8 921 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 PSEN2P49810 448 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 SCRN1Q12765 414 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 AP3B2Q13367 1082 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 SHHQ15465 462 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 MFSD5Q6N075 450 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 TRIM22Q8IYM9 498 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 IL17RAQ96F46 866 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 LRCH3Q96II8 777 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 C6orf50Q9HD87 102 aa26.01■■□□□ 1.75
TRAF4-211ENST00000478021 NOP56O00567 594 aaKnown RBP26■■□□□ 1.75
TRAF4-211ENST00000478021 DTNBO60941 627 aa26■■□□□ 1.75
TRAF4-211ENST00000478021 ATP9AO75110 1047 aa26■■□□□ 1.75
TRAF4-211ENST00000478021 HOXD8P13378 290 aaPredicted RBP26■■□□□ 1.75
TRAF4-211ENST00000478021 MTMR1Q13613 665 aa26■■□□□ 1.75
TRAF4-211ENST00000478021 MFSD10Q14728 455 aa26■■□□□ 1.75
TRAF4-211ENST00000478021 METTL7BQ6UX53 244 aa26■■□□□ 1.75
TRAF4-211ENST00000478021 TEX2Q8IWB9 1127 aa26■■□□□ 1.75
TRAF4-211ENST00000478021 NOC4LQ9BVI4 516 aaKnown RBP26■■□□□ 1.75
TRAF4-211ENST00000478021 SLKQ9H2G2 1235 aaPredicted RBP26■■□□□ 1.75
TRAF4-211ENST00000478021 PPFIA4O75335 1185 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 F2P00734 622 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 CSF2RAP15509 400 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 KIAA0753Q2KHM9 967 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 CPLX2Q6PUV4 134 aaKnown RBP25.99■■□□□ 1.75
TRAF4-211ENST00000478021 CCDC148Q8NFR7 591 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 RASGRP4Q8TDF6 673 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 SENP7Q9BQF6 1050 aa25.99■■□□□ 1.75
TRAF4-211ENST00000478021 KATNAL1Q9BW62 490 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms