RNA–Protein interactions for RNA: ENST00000477937.2

HDAC7-222, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 410 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-222ENST00000477937 GOLGA8BA8MQT2 603 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 EPB41L2O43491 1005 aaKnown RBP15.87■□□□□ 0.13
HDAC7-222ENST00000477937 PPFIA4O75335 1185 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 UBA1P22314 1058 aaKnown RBP15.87■□□□□ 0.13
HDAC7-222ENST00000477937 ICAM3P32942 547 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 RCAN1P53805 252 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 ZNF697Q5TEC3 545 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 RPUSD2Q8IZ73 545 aaKnown RBP15.87■□□□□ 0.13
HDAC7-222ENST00000477937 KAT2BQ92831 832 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 GPKOWQ92917 476 aaPredicted RBP eCLIP15.87■□□□□ 0.13
HDAC7-222ENST00000477937 SPATA33Q96N06 139 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 CNTNAP5Q8WYK1 1306 aa15.87■□□□□ 0.13
HDAC7-222ENST00000477937 KAT6AQ92794 2004 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-222ENST00000477937 CCDC196A0A1B0GTZ2 297 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-222ENST00000477937 SPDYE3A6NKU9 549 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 SPATA31C2B4DYI2 1134 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 FIBPO43427 364 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 SORBS3O60504 671 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 FGBP02675 491 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 PSEN2P49810 448 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 NEDD9Q14511 834 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 PTGISQ16647 500 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 HSDL1Q3SXM5 330 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 Q6ZUG5 572 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 NLRX1Q86UT6 975 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 SESTD1Q86VW0 696 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 WNT8AQ9H1J5 351 aa15.86■□□□□ 0.13
HDAC7-222ENST00000477937 MTIF3Q9H2K0 278 aaKnown RBP15.86■□□□□ 0.13
HDAC7-222ENST00000477937 V9GY48 417 aaPredicted RBP15.86■□□□□ 0.13
HDAC7-222ENST00000477937 LAMA2P24043 3122 aaKnown RBP15.85■□□□□ 0.13
HDAC7-222ENST00000477937 hCG_1984214I3L0E3 225 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 CENPBP07199 599 aaPredicted RBP15.85■□□□□ 0.13
HDAC7-222ENST00000477937 ZNF286BP0CG31 522 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 HOXD8P13378 290 aaPredicted RBP15.85■□□□□ 0.13
HDAC7-222ENST00000477937 RPS6KB1P23443 525 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 CDC27P30260 824 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 METAP2P50579 478 aaKnown RBP eCLIP15.85■□□□□ 0.131e-7■□□□□ 9.5
HDAC7-222ENST00000477937 NAPAP54920 295 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 APOBRQ0VD83 1088 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 FUT2Q10981 343 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 BFSP2Q13515 415 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 WWC2Q6AWC2 1192 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 FBXL16Q8N461 479 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 ZNF713Q8N859 430 aaPredicted RBP15.85■□□□□ 0.13
HDAC7-222ENST00000477937 C7orf31Q8N865 590 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 RETREG2Q8NC44 543 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 BRF1Q92994 677 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 SCLYQ96I15 445 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 ALG1Q9BT22 464 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 EHMT1Q9H9B1 1298 aa15.85■□□□□ 0.13
HDAC7-222ENST00000477937 FAM217BQ9NTX9 383 aaPredicted RBP15.85■□□□□ 0.13
HDAC7-222ENST00000477937 TANC1Q9C0D5 1861 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 HAS3O00219 553 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 NOP56O00567 594 aaKnown RBP15.84■□□□□ 0.13
HDAC7-222ENST00000477937 F2P00734 622 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 ADD1P35611 737 aaKnown RBP15.84■□□□□ 0.13
HDAC7-222ENST00000477937 MFSD10Q14728 455 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 UBE2SQ16763 222 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 KIAA0753Q2KHM9 967 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 GDF6Q6KF10 455 aaPredicted RBP15.84■□□□□ 0.13
HDAC7-222ENST00000477937 CYFIP1Q7L576 1253 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 TEX2Q8IWB9 1127 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 CCDC155Q8N6L0 562 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 HERVK_113Q902F9 699 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 CDHR1Q96JP9 859 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 FAM161BQ96MY7 647 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 SENP7Q9BQF6 1050 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 HDAC6Q9UBN7 1215 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 GTF2IRD1Q9UHL9 959 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 PCDHA6Q9UN73 950 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 PCDHA8Q9Y5H6 950 aa15.84■□□□□ 0.13
HDAC7-222ENST00000477937 GBF1Q92538 1859 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 PFKMP08237 780 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 SEMA3FQ13275 785 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 PPP1R18Q6NYC8 613 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 METTL7BQ6UX53 244 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 OTOP2Q7RTS6 562 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 GIMAP8Q8ND71 665 aaPredicted RBP15.83■□□□□ 0.12
HDAC7-222ENST00000477937 GPRASP2Q96D09 838 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 C16orf70Q9BSU1 422 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 USP26Q9BXU7 913 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 AGXT2Q9BYV1 514 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 GLT8D2Q9H1C3 349 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 SEMA6BQ9H3T3 888 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 BCAS3Q9H6U6 928 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 RIC8AQ9NPQ8 531 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 STXBP5LQ9Y2K9 1186 aa15.83■□□□□ 0.12
HDAC7-222ENST00000477937 TMEM265A0A087WTH1 108 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 SMCO2A6NFE2 343 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 H3BRB1 525 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 STXBP3O00186 592 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
HDAC7-222ENST00000477937 IQCF3P0C7M6 154 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 RFC2P35250 354 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 ADCY7P51828 1080 aa15.82■□□□□ 0.12
HDAC7-222ENST00000477937 RUFY3Q7L099 469 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms