RNA–Protein interactions for RNA: ENST00000477928.1

SOX2-OT-208, SOX2 overlapping transcript, humanhuman

TSL 2 BASIC

Gene SOX2-OT, Length 902 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-208ENST00000477928 RUFY3Q7L099 469 aa15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 SCLYQ96I15 445 aa15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 GLT8D2Q9H1C3 349 aa15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 ZSWIM6Q9HCJ5 1215 aa15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 FAM217BQ9NTX9 383 aaPredicted RBP15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 RTEL1Q9NZ71 1219 aa15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 FRMPD4Q14CM0 1322 aa15.9■□□□□ 0.14
SOX2-OT-208ENST00000477928 KLF18A0A0U1RQI7 1052 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 GRXCR1A8MXD5 290 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 PPFIA3O75145 1194 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 TGFB3P10600 412 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 CASTP20810 708 aaKnown RBP15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 UBA1P22314 1058 aaKnown RBP15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 CDC27P30260 824 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 TMEM240Q5SV17 173 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 Q6ZUG5 572 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 CTAGE1Q96RT6 745 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 CYP46A1Q9Y6A2 500 aa15.89■□□□□ 0.13
SOX2-OT-208ENST00000477928 GOLGA8AA7E2F4 631 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 GOLGA8BA8MQT2 603 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 ADAMTS3O15072 1205 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 GGPS1O95749 300 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 METAP2P50579 478 aaKnown RBP eCLIP15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 APOBRQ0VD83 1088 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 HIC1Q14526 733 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 HSDL1Q3SXM5 330 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 WWC2Q6AWC2 1192 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 ZNF365Q70YC5 407 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 HEATR3Q7Z4Q2 680 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 EMID1Q96A84 441 aaPredicted RBP15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 IL17RAQ96F46 866 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 MTMR10Q9NXD2 777 aa15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 CXXC1Q9P0U4 656 aaPredicted RBP15.88■□□□□ 0.13
SOX2-OT-208ENST00000477928 COL6A3P12111 3177 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 CCND2P30279 289 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 MYSM1Q5VVJ2 828 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 DHX37Q8IY37 1157 aaKnown RBP15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 SMARCC2Q8TAQ2 1214 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 BRF1Q92994 677 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 PGBD1Q96JS3 809 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 GUCD1Q96NT3 240 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 ALG1Q9BT22 464 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 TTYH1Q9H313 450 aaPredicted RBP15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 PSTPIP2Q9H939 334 aa15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 NAP1L2Q9ULW6 460 aaPredicted RBP15.87■□□□□ 0.13
SOX2-OT-208ENST00000477928 ZNF200P98182 395 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 PPIGQ13427 754 aaKnown RBP eCLIP15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 GNPTABQ3T906 1256 aa15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 CELF3Q5SZQ8 465 aaKnown RBP15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 GDF6Q6KF10 455 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 TMEM199Q8N511 208 aa15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 DHX38Q92620 1227 aaKnown RBP15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 INPP4AQ96PE3 977 aaPredicted RBP15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 EHMT1Q9H9B1 1298 aa15.86■□□□□ 0.13
SOX2-OT-208ENST00000477928 ADD1P35611 737 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 PBX2P40425 430 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 MCTP2Q6DN12 878 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 GPR153Q6NV75 609 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 FAM177A1Q8N128 213 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 PPTC7Q8NI37 304 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 CCDC12Q8WUD4 166 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 WNT8BQ93098 351 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 ZNF274Q96GC6 653 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 SPATA33Q96N06 139 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 LARP6Q9BRS8 491 aaKnown RBP15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 IL23AQ9NPF7 189 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 HDAC6Q9UBN7 1215 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 V9GY48 417 aaPredicted RBP15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 CHD9Q3L8U1 2897 aa15.85■□□□□ 0.13
SOX2-OT-208ENST00000477928 SCN10AQ9Y5Y9 1956 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 F2P00734 622 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 FOSP01100 380 aaPredicted RBP15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 HOXD8P13378 290 aaPredicted RBP15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 ICAM3P32942 547 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 PSEN2P49810 448 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 SP4Q02446 784 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 LAMC2Q13753 1193 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 MFSD10Q14728 455 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 DGKDQ16760 1214 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 PCNX4Q63HM2 1172 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 NFRKBQ6P4R8 1299 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 OTOP2Q7RTS6 562 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 DEFB128Q7Z7B8 93 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 TRIM50Q86XT4 487 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 CDHR1Q96JP9 859 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 RNF26Q9BY78 433 aaPredicted RBP15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 TMEM260Q9NX78 707 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 BARHL2Q9NY43 387 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 PKD2L1Q9P0L9 805 aa15.84■□□□□ 0.13
SOX2-OT-208ENST00000477928 SPATA31C2B4DYI2 1134 aa15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 STXBP3O00186 592 aa15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 HAS3O00219 553 aa15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 PRPF3O43395 683 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 DTNBO60941 627 aa15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 ATP9AO75110 1047 aa15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 ITGB5P18084 799 aa15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 SMAD3P84022 425 aaKnown RBP15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 PTPN11Q06124 597 aaPredicted RBP15.83■□□□□ 0.12
SOX2-OT-208ENST00000477928 ANKRD1Q15327 319 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms