RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	KCNC2	Q96PR1	638 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	ORAI2	Q96SN7	254 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	MIPEP	Q99797	713 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	FUCA2	Q9BTY2	467 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	MCOLN1	Q9GZU1	580 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	RNF32	Q9H0A6	362 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	TMX4	Q9H1E5	349 aa	Predicted RBP	5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	SLC12A5	Q9H2X9	1139 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZNF446	Q9NWS9	450 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZSWIM5	Q9P217	1185 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	IMPACT	Q9P2X3	320 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	TMEM59L	Q9UK28	342 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	PYCARD	Q9ULZ3	195 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	ATP7B	P35670	1465 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	KIF1A	Q12756	1690 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	PRR36	Q9H6K5	1346 aa		5.43	□□□□□ -1.54
PTCD3-212	ENST00000477520	RGPD8	O14715	1765 aa	Predicted RBP	5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	SSH2	Q76I76	1423 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ANKRD33B	A6NCL7	494 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	GOLGA6L9	A6NEM1	432 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	WASH4P	A8MWX3	477 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ENC1	O14682	589 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	TRIM37	O94972	964 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	CBX7	O95931	251 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	DDR1	Q08345	913 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	INPP5A	Q14642	412 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZSCAN25	Q6NSZ9	544 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	BRINP3	Q76B58	766 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	KCT2	Q8NC54	265 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	MRFAP1L1	Q96HT8	127 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	CITED4	Q96RK1	184 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	TEX13A	Q9BXU3	409 aa	Predicted RBP	5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ADAMTS10	Q9H324	1103 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ARFGAP3	Q9NP61	516 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	CLIP2	Q9UDT6	1046 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZNF215	Q9UL58	517 aa	Predicted RBP	5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	PCDHA4	Q9UN74	947 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZDHHC9	Q9Y397	364 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	MRVI1	Q9Y6F6	885 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ACE	P12821	1306 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	PHLPP2	Q6ZVD8	1323 aa		5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	ATXN2	Q99700	1313 aa	Known RBP	5.42	□□□□□ -1.54
PTCD3-212	ENST00000477520	TOPAZ1	Q8N9V7	1692 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	MYOCOS	A0A1B0GUC4	107 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	CCDC189	A1A4V9	331 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	EIF3CL	B5ME19	914 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	IPO7	O95373	1038 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	DLG4	P78352	724 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	ICA1	Q05084	483 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	TNK2	Q07912	1038 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	NEDD9	Q14511	834 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	SMC1A	Q14683	1233 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	CRYM	Q14894	314 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	BRD3	Q15059	726 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	CCDC93	Q567U6	631 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	DNAJC21	Q5F1R6	531 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	NXPE4	Q6UWF7	544 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	KRT28	Q7Z3Y7	464 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	TADA2B	Q86TJ2	420 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	PLA2G4D	Q86XP0	818 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	ANKRD18A	Q8IVF6	992 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	CCDC50	Q8IVM0	306 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	C3orf58	Q8NDZ4	430 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	TDRD7	Q8NHU6	1098 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZNF507	Q8TCN5	953 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	HNRNPLL	Q8WVV9	542 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	TCP11	Q8WWU5	503 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	ERCC4	Q92889	916 aa	Predicted RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	CFAP53	Q96M91	514 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	DRC1	Q96MC2	740 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	C16orf45	Q96MC5	204 aa	Predicted RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	EIF3C	Q99613	913 aa	Known RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	GBP3	Q9H0R5	595 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	TTC21A	Q8NDW8	1320 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	USP32	Q8NFA0	1604 aa		5.41	□□□□□ -1.54
PTCD3-212	ENST00000477520	CPSF1	Q10570	1443 aa	Known RBP	5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	EDC4	Q6P2E9	1401 aa	Known RBP	5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	ANKRD18B	A2A2Z9	1011 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	CCDC151	A5D8V7	595 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	TRIM13	O60858	407 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	PPFIA4	O75335	1185 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	ERLIN1	O75477	346 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	SETSIP	P0DME0	302 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	RLBP1	P12271	317 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	CAST	P20810	708 aa	Known RBP	5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	RDX	P35241	583 aa	Known RBP	5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	ZNF75D	P51815	510 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	LRFN4	Q6PJG9	635 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	DBX2	Q6ZNG2	339 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	CCDC186	Q7Z3E2	898 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	GGN	Q86UU5	652 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	USP48	Q86UV5	1035 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	LRRC8A	Q8IWT6	810 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	DRC7	Q8IY82	874 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	CCDC150	Q8NCX0	1101 aa		5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	JARID2	Q92833	1246 aa	Predicted RBP	5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	LRRC59	Q96AG4	307 aa	Known RBP	5.4	□□□□□ -1.54
PTCD3-212	ENST00000477520	DDX19A	Q9NUU7	478 aa	Known RBP	5.4	□□□□□ -1.54

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