RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 SGSM2O43147 1006 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 KRT15P19012 456 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 GYS2P54840 703 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 SRSF3P84103 164 aaKnown RBP4.81□□□□□ -1.64
TARDBP-208ENST00000477447 ZNF200P98182 395 aaPredicted RBP4.81□□□□□ -1.64
TARDBP-208ENST00000477447 EMC4Q5J8M3 183 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 EGFLAMQ63HQ2 1017 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 ABHD17CQ6PCB6 329 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 IGSF22Q8N9C0 903 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 ALG3Q92685 438 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 CBLCQ9ULV8 474 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 ZNF652Q9Y2D9 606 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 PCDHB4Q9Y5E5 795 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 MYOCOSA0A1B0GUC4 107 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 B4E1Z4 1266 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 HRKO00198 91 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 HGSO14964 777 aaPredicted RBP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 SLC27A2O14975 620 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 NKRFO15226 690 aaKnown RBP eCLIP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 MAFKO60675 156 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 KPNA6O60684 536 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 CKMP06732 381 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 JMJD7P0C870 316 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 FLT3P36888 993 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 TM4SF20Q53R12 229 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 PIK3R6Q5UE93 754 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 TMEM132EQ6IEE7 984 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 ZCCHC8Q6NZY4 707 aaKnown RBP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 MILR1Q7Z6M3 343 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 LRRTM3Q86VH5 581 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 KRTAP1-3Q8IUG1 177 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 FBXO15Q8NCQ5 510 aaPredicted RBP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 PANK1Q8TE04 598 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 TSPAN17Q96FV3 270 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 CELF4Q9BZC1 486 aaKnown RBP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 MCOLN1Q9GZU1 580 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 SLC6A20Q9NP91 592 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 INTS7Q9NVH2 962 aaKnown RBP4.8□□□□□ -1.64
TARDBP-208ENST00000477447 SIRT5Q9NXA8 310 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 MYOTQ9UBF9 498 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 PLA2G2DQ9UNK4 145 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 RNF114Q9Y508 228 aa4.8□□□□□ -1.64
TARDBP-208ENST00000477447 CADPSQ9ULU8 1353 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 M0R2C6 588 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 GSTA4O15217 222 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 PEX10O60683 326 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 GLRX3O76003 335 aaKnown RBP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 ZBTB7AO95365 584 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 MYCLP1P12525 358 aaPredicted RBP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 PDE6AP16499 860 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 NEK4P51957 841 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 SLC9A5Q14940 896 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 GPR19Q15760 415 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 CRY1Q16526 586 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 TMEM177Q53S58 311 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 HABP4Q5JVS0 413 aaKnown RBP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 C16orf59Q7L2K0 433 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 UHMK1Q8TAS1 419 aaKnown RBP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 YIPF4Q9BSR8 244 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 TARS2Q9BW92 718 aaKnown RBP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 CD244Q9BZW8 370 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 SMOC1Q9H4F8 434 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 SAMD15Q9P1V8 674 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 MBD1Q9UIS9 605 aaPredicted RBP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 DSEQ9UL01 958 aa4.79□□□□□ -1.64
TARDBP-208ENST00000477447 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.79□□□□□ -1.64
TARDBP-208ENST00000477447 TCRBV5S2A0A599 114 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 TCRBV5S4A2TA0A5A2 114 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 ZNF561-AS1K7EIQ3 104 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 KCNK3O14649 394 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 PAX4O43316 350 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 PDE8AO60658 829 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 SEMA7AO75326 666 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 TADA3O75528 432 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 NPTXRO95502 500 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 KCNA6P17658 529 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 PMLP29590 882 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 NCKAP1LP55160 1127 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 JAM2P57087 298 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 CFAP100Q494V2 611 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 CDCA2Q69YH5 1023 aaPredicted RBP4.78□□□□□ -1.64
TARDBP-208ENST00000477447 CYP4F22Q6NT55 531 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 ARHGAP36Q6ZRI8 547 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 EP400NLQ6ZTU2 488 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 UBE2R2Q712K3 238 aaPredicted RBP4.78□□□□□ -1.64
TARDBP-208ENST00000477447 OSTM1Q86WC4 334 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 PTRH1Q86Y79 214 aaKnown RBP4.78□□□□□ -1.64
TARDBP-208ENST00000477447 RBM12BQ8IXT5 1001 aaKnown RBP4.78□□□□□ -1.64
TARDBP-208ENST00000477447 FAM177A1Q8N128 213 aaPredicted RBP4.78□□□□□ -1.64
TARDBP-208ENST00000477447 ARRDC4Q8NCT1 418 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 PHOSPHO1Q8TCT1 267 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 SGPP1Q9BX95 441 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 CNTD2Q9H8S5 307 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 ASH2LQ9UBL3 628 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 NUB1Q9Y5A7 615 aa4.78□□□□□ -1.64
TARDBP-208ENST00000477447 TEX51A0A1B0GUA7 166 aa4.77□□□□□ -1.65
TARDBP-208ENST00000477447 GSG1L2A8MUP6 293 aa4.77□□□□□ -1.65
TARDBP-208ENST00000477447 MAN2B1O00754 1011 aa4.77□□□□□ -1.65
TARDBP-208ENST00000477447 FARP2O94887 1054 aaPredicted RBP4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms