RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
LSM2-212ENST00000477182 TGS1Q96RS0 853 aaKnown RBP13.36□□□□□ -0.27
LSM2-212ENST00000477182 ZBED2Q9BTP6 218 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 SLKQ9H2G2 1235 aaPredicted RBP13.36□□□□□ -0.27
LSM2-212ENST00000477182 TRMT13Q9NUP7 481 aaKnown RBP13.36□□□□□ -0.27
LSM2-212ENST00000477182 SYNPO2Q9UMS6 1093 aa13.36□□□□□ -0.27
LSM2-212ENST00000477182 K7ELQ4 463 aaPredicted RBP13.35□□□□□ -0.27
LSM2-212ENST00000477182 PFKFB2O60825 505 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 CALM1P0DP23 149 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 CALM2P0DP24 149 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 CALM3P0DP25 149 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 PDHBP11177 359 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 METAP2P50579 478 aaKnown RBP eCLIP13.35□□□□□ -0.27
LSM2-212ENST00000477182 ERVK-21P61565 698 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 GRM4Q14833 912 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 PKN1Q16512 942 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 RTN1Q16799 776 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 IQSEC1Q6DN90 963 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 PHOX2BQ99453 314 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 SUGCTQ9HAC7 445 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 NCOA5Q9HCD5 579 aaKnown RBP13.35□□□□□ -0.27
LSM2-212ENST00000477182 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
LSM2-212ENST00000477182 POLR3EQ9NVU0 708 aa13.35□□□□□ -0.27
LSM2-212ENST00000477182 NID2Q14112 1375 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 TANC1Q9C0D5 1861 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 IQCF3P0C7M6 154 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 RCAN1P53805 252 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 ZP2Q05996 745 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 ST3GAL1Q11201 340 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 BFSP2Q13515 415 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 CCDC96Q2M329 555 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 SPRED2Q7Z698 418 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 CCDC83Q8IWF9 413 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 FANCBQ8NB91 859 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 CTCFLQ8NI51 663 aaPredicted RBP13.34□□□□□ -0.27
LSM2-212ENST00000477182 DCAF4Q8WV16 495 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 GTF3C6Q969F1 213 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 NUP88Q99567 741 aaPredicted RBP13.34□□□□□ -0.27
LSM2-212ENST00000477182 GPCPD1Q9NPB8 672 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
LSM2-212ENST00000477182 FRMPD2Q68DX3 1309 aaPredicted RBP13.34□□□□□ -0.27
LSM2-212ENST00000477182 SIP14410 1827 aa13.34□□□□□ -0.27
LSM2-212ENST00000477182 LCHNA4D1U4 455 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 C19orf67A6NJJ6 358 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
LSM2-212ENST00000477182 GOLGA8HP0CJ92 632 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 SNHG28P0DPA3 235 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 SMPD1P17405 629 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 CDC27P30260 824 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 SLC1A4P43007 532 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 OAZ1P54368 228 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 ZNF543Q08ER8 600 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 SCRN1Q12765 414 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 BECN1Q14457 450 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 KCTD1Q719H9 257 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 ADHFE1Q8IWW8 467 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 STAG2Q8N3U4 1231 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 GMCL1Q96IK5 515 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 MAP3K14Q99558 947 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 RAD9AQ99638 391 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 FAM217BQ9NTX9 383 aaPredicted RBP13.33□□□□□ -0.28
LSM2-212ENST00000477182 MAD2L2Q9UI95 211 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 PTPRSQ13332 1948 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 TET1Q8NFU7 2136 aa13.33□□□□□ -0.28
LSM2-212ENST00000477182 PALM3A6NDB9 673 aaPredicted RBP13.32□□□□□ -0.28
LSM2-212ENST00000477182 GFRA3O60609 400 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 DTNBO60941 627 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 BMP3P12645 472 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 KIF5BP33176 963 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 ADD1P35611 737 aaKnown RBP13.32□□□□□ -0.28
LSM2-212ENST00000477182 WDR5P61964 334 aaKnown RBP13.32□□□□□ -0.28
LSM2-212ENST00000477182 CNTN2Q02246 1040 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 PTPROQ16827 1216 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 ASPRV1Q53RT3 343 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 TTBK2Q6IQ55 1244 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 BMP8AQ7Z5Y6 402 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 FAM133AQ8N9E0 248 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 PRSS33Q8NF86 280 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 POP1Q99575 1024 aaKnown RBP13.32□□□□□ -0.28
LSM2-212ENST00000477182 IRF2BPLQ9H1B7 796 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 SLC38A10Q9HBR0 1119 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
LSM2-212ENST00000477182 RBM28Q9NW13 759 aaKnown RBP13.32□□□□□ -0.28
LSM2-212ENST00000477182 MTUS1Q9ULD2 1270 aa13.32□□□□□ -0.28
LSM2-212ENST00000477182 TRIOO75962 3097 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 CCDC196A0A1B0GTZ2 297 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 H3BQ06 376 aaPredicted RBP13.31□□□□□ -0.28
LSM2-212ENST00000477182 PLEKHA8P1O95397 391 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 FDX1P10109 184 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 CPT1AP50416 773 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 PPP2R5BQ15173 497 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 TIGD5Q53EQ6 642 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 HERC4Q5GLZ8 1057 aaPredicted RBP13.31□□□□□ -0.28
LSM2-212ENST00000477182 GPATCH4Q5T3I0 446 aaKnown RBP13.31□□□□□ -0.28
LSM2-212ENST00000477182 TMTC3Q6ZXV5 915 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 CMTR1Q8N1G2 835 aaKnown RBP13.31□□□□□ -0.28
LSM2-212ENST00000477182 CCDC155Q8N6L0 562 aa13.31□□□□□ -0.28
LSM2-212ENST00000477182 MRPL38Q96DV4 380 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms