RNA–Protein interactions for RNA: ENST00000476824.1

ITGA4-208, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,004 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-208ENST00000476824 RNF38Q9H0F5 515 aa5.42□□□□□ -1.54
ITGA4-208ENST00000476824 ZSWIM4Q9H7M6 989 aa5.42□□□□□ -1.54
ITGA4-208ENST00000476824 KANSL2Q9H9L4 492 aa5.42□□□□□ -1.54
ITGA4-208ENST00000476824 FAN1Q9Y2M0 1017 aa5.42□□□□□ -1.54
ITGA4-208ENST00000476824 MRPS23Q9Y3D9 190 aaKnown RBP5.42□□□□□ -1.54
ITGA4-208ENST00000476824 DGKIO75912 1065 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 GRK2P25098 689 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 GRK3P35626 688 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 SUMO1P63165 101 aaKnown RBP5.41□□□□□ -1.54
ITGA4-208ENST00000476824 CACNB2Q08289 660 aaPredicted RBP5.41□□□□□ -1.54
ITGA4-208ENST00000476824 RSPO2Q6UXX9 243 aaPredicted RBP5.41□□□□□ -1.54
ITGA4-208ENST00000476824 B3GNT8Q7Z7M8 397 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 STK32CQ86UX6 486 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 IFNL3Q8IZI9 196 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 UBXN4Q92575 508 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 KISS1RQ969F8 398 aaPredicted RBP5.41□□□□□ -1.54
ITGA4-208ENST00000476824 DHRS4Q9BTZ2 278 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 EPB41L1Q9H4G0 881 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 PIF1Q9H611 641 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 IPPKQ9H8X2 491 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 PCDHA8Q9Y5H6 950 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 PTCH2Q9Y6C5 1203 aa5.41□□□□□ -1.54
ITGA4-208ENST00000476824 A0A1B0GTL3 188 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 TCRBV5S2A0A599 114 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 HGSO14964 777 aaPredicted RBP5.4□□□□□ -1.54
ITGA4-208ENST00000476824 TADA3O75528 432 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 SOD2P04179 222 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 TCERG1LQ5VWI1 586 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 ETV3LQ6ZN32 361 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 MIB1Q86YT6 1006 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.4□□□□□ -1.54
ITGA4-208ENST00000476824 FNIP1Q8TF40 1166 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 CPA5Q8WXQ8 436 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 IPO9Q96P70 1041 aaKnown RBP5.4□□□□□ -1.54
ITGA4-208ENST00000476824 ZFYVE21Q9BQ24 234 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 PCDHB4Q9Y5E5 795 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 PCDHA9Q9Y5H5 950 aa5.4□□□□□ -1.54
ITGA4-208ENST00000476824 FFAR3O14843 346 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 SLC27A2O14975 620 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 NKRFO15226 690 aaKnown RBP eCLIP5.39□□□□□ -1.55
ITGA4-208ENST00000476824 LTFP02788 710 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 SMAD4Q13485 552 aaKnown RBP5.39□□□□□ -1.55
ITGA4-208ENST00000476824 KIZQ2M2Z5 673 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 EMC4Q5J8M3 183 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 CD300LDQ6UXZ3 194 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 JMYQ8N9B5 988 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 TP53I13Q8NBR0 393 aaPredicted RBP5.39□□□□□ -1.55
ITGA4-208ENST00000476824 ZNF526Q8TF50 670 aaPredicted RBP5.39□□□□□ -1.55
ITGA4-208ENST00000476824 THAP3Q8WTV1 239 aaPredicted RBP5.39□□□□□ -1.55
ITGA4-208ENST00000476824 PTPRN2Q92932 1015 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 GORASP1Q9BQQ3 440 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 CHMP4AQ9BY43 222 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 MYOTQ9UBF9 498 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 NDOR1Q9UHB4 597 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 ZNF652Q9Y2D9 606 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 PMF1-BGLAPU3KQ54 211 aa5.39□□□□□ -1.55
ITGA4-208ENST00000476824 ARID1BQ8NFD5 2236 aaPredicted RBP5.38□□□□□ -1.55
ITGA4-208ENST00000476824 TRIM13O60858 407 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 BMP7P18075 431 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 HTRA3P83110 453 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 GUCY1A3Q02108 690 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 GRIN1Q05586 938 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 LONRF2Q1L5Z9 754 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 CR1LQ2VPA4 569 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 VWA3BQ502W6 1294 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 C2orf27AQ580R0 203 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 DPH6Q7L8W6 267 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 OTOP3Q7RTS5 596 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 MAMDC2Q7Z304 686 aaPredicted RBP5.38□□□□□ -1.55
ITGA4-208ENST00000476824 MTDHQ86UE4 582 aaKnown RBP5.38□□□□□ -1.55
ITGA4-208ENST00000476824 FAM126BQ8IXS8 530 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 SLC7A14Q8TBB6 771 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 SLC52A2Q9HAB3 445 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 SLC6A20Q9NP91 592 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 RBPJLQ9UBG7 517 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 TELO2Q9Y4R8 837 aa5.38□□□□□ -1.55
ITGA4-208ENST00000476824 CCDC180Q9P1Z9 1646 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 CRTAMO95727 393 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 SRGAP2CP0DJJ0 459 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 CYP2C8P10632 490 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 GNAT1P11488 350 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 GABREP78334 506 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 DLX2Q07687 328 aaPredicted RBP5.37□□□□□ -1.55
ITGA4-208ENST00000476824 SQSTM1Q13501 440 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 NFE2L2Q16236 605 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 SIAH1Q8IUQ4 282 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 SYT8Q8NBV8 401 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 ZSWIM2Q8NEG5 633 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 PCDH19Q8TAB3 1148 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 CLEC4DQ8WXI8 215 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 ZBTB8AQ96BR9 441 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 MRFAP1L1Q96HT8 127 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 YIPF4Q9BSR8 244 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 ALG1Q9BT22 464 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 CD244Q9BZW8 370 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 SPATA6Q9NWH7 488 aaPredicted RBP5.37□□□□□ -1.55
ITGA4-208ENST00000476824 ASH2LQ9UBL3 628 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 WASF3Q9UPY6 502 aa5.37□□□□□ -1.55
ITGA4-208ENST00000476824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.36□□□□□ -1.55
ITGA4-208ENST00000476824 TCRBV5S4A2TA0A5A2 114 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms