RNA–Protein interactions for RNA: ENST00000476806.5

RBM39-230, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-230ENST00000476806 STAM2O75886 525 aa8.79□□□□□ -1
RBM39-230ENST00000476806 SLC10A3P09131 477 aa8.79□□□□□ -1
RBM39-230ENST00000476806 ATP2B1P20020 1258 aa8.79□□□□□ -1
RBM39-230ENST00000476806 CYP3A7P24462 503 aa8.79□□□□□ -1
RBM39-230ENST00000476806 SREBF1P36956 1147 aa8.79□□□□□ -1
RBM39-230ENST00000476806 STAT6P42226 847 aa8.79□□□□□ -1
RBM39-230ENST00000476806 NLRP12P59046 1061 aa8.79□□□□□ -1
RBM39-230ENST00000476806 GHRHRQ02643 423 aa8.79□□□□□ -1
RBM39-230ENST00000476806 INF2Q27J81 1249 aa8.79□□□□□ -1
RBM39-230ENST00000476806 NT5DC1Q5TFE4 455 aa8.79□□□□□ -1
RBM39-230ENST00000476806 SHC4Q6S5L8 630 aa8.79□□□□□ -1
RBM39-230ENST00000476806 NIPA1Q7RTP0 329 aa8.79□□□□□ -1
RBM39-230ENST00000476806 ANKRD13AQ8IZ07 590 aa8.79□□□□□ -1
RBM39-230ENST00000476806 PROCA1Q8NCQ7 364 aaPredicted RBP8.79□□□□□ -1
RBM39-230ENST00000476806 ANKRD20A12PQ8NF67 263 aa8.79□□□□□ -1
RBM39-230ENST00000476806 NEK9Q8TD19 979 aa8.79□□□□□ -1
RBM39-230ENST00000476806 PIBF1Q8WXW3 757 aa8.79□□□□□ -1
RBM39-230ENST00000476806 CDHR1Q96JP9 859 aa8.79□□□□□ -1
RBM39-230ENST00000476806 FUCA2Q9BTY2 467 aa8.79□□□□□ -1
RBM39-230ENST00000476806 ATP13A2Q9NQ11 1180 aa8.79□□□□□ -1
RBM39-230ENST00000476806 DISC1Q9NRI5 854 aa8.79□□□□□ -1
RBM39-230ENST00000476806 GJB4Q9NTQ9 266 aa8.79□□□□□ -1
RBM39-230ENST00000476806 HOXC10Q9NYD6 342 aa8.79□□□□□ -1
RBM39-230ENST00000476806 FBXO40Q9UH90 709 aa8.79□□□□□ -1
RBM39-230ENST00000476806 DDX25Q9UHL0 483 aaKnown RBP8.79□□□□□ -1
RBM39-230ENST00000476806 TUBE1Q9UJT0 475 aa8.79□□□□□ -1
RBM39-230ENST00000476806 PRR12Q9ULL5 1215 aa8.79□□□□□ -1
RBM39-230ENST00000476806 ADGRG1Q9Y653 693 aa8.79□□□□□ -1
RBM39-230ENST00000476806 hCG_1642624A0A1W2PR95 340 aa8.78□□□□□ -1
RBM39-230ENST00000476806 FAM196BA6NMK8 535 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L15C9J2P7 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L13C9JLJ4 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L11C9JVI0 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L18D6R9N7 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L22D6RA61 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L17D6RBQ6 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L19D6RCP7 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L20D6RJB6 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CXCL11O14625 94 aa8.78□□□□□ -1
RBM39-230ENST00000476806 ATP2A1O14983 1001 aa8.78□□□□□ -1
RBM39-230ENST00000476806 GPR37O15354 613 aa8.78□□□□□ -1
RBM39-230ENST00000476806 POLR2DO15514 142 aaKnown RBP8.78□□□□□ -1
RBM39-230ENST00000476806 MAFGO15525 162 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CBFA2T2O43439 604 aa8.78□□□□□ -1
RBM39-230ENST00000476806 DKC1O60832 514 aaKnown RBP eCLIP8.78□□□□□ -1
RBM39-230ENST00000476806 FLOT1O75955 427 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CYP3A4P08684 503 aa8.78□□□□□ -1
RBM39-230ENST00000476806 VEGFAP15692 232 aaPredicted RBP8.78□□□□□ -1
RBM39-230ENST00000476806 PTPRAP18433 802 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CIITAP33076 1130 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CTCFP49711 727 aaPredicted RBP8.78□□□□□ -1
RBM39-230ENST00000476806 PPATQ06203 517 aa8.78□□□□□ -1
RBM39-230ENST00000476806 USP17L24Q0WX57 530 aa8.78□□□□□ -1
RBM39-230ENST00000476806 HIC1Q14526 733 aa8.78□□□□□ -1
RBM39-230ENST00000476806 ZNF174Q15697 407 aa8.78□□□□□ -1
RBM39-230ENST00000476806 Q4G0T1 1027 aa8.78□□□□□ -1
RBM39-230ENST00000476806 SH3D19Q5HYK7 790 aa8.78□□□□□ -1
RBM39-230ENST00000476806 FAM83BQ5T0W9 1011 aa8.78□□□□□ -1
RBM39-230ENST00000476806 RRAGBQ5VZM2 374 aa8.78□□□□□ -1
RBM39-230ENST00000476806 MIGA2Q7L4E1 593 aa8.78□□□□□ -1
RBM39-230ENST00000476806 SYMPKQ92797 1274 aaKnown RBP8.78□□□□□ -1
RBM39-230ENST00000476806 SPSB2Q99619 263 aa8.78□□□□□ -1
RBM39-230ENST00000476806 ANO3Q9BYT9 981 aa8.78□□□□□ -1
RBM39-230ENST00000476806 WDR11Q9BZH6 1224 aa8.78□□□□□ -1
RBM39-230ENST00000476806 FTOQ9C0B1 505 aaKnown RBP eCLIP8.78□□□□□ -1
RBM39-230ENST00000476806 TANGO6Q9C0B7 1094 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CSRNP2Q9H175 543 aa8.78□□□□□ -1
RBM39-230ENST00000476806 CCPG1Q9ULG6 757 aa8.78□□□□□ -1
RBM39-230ENST00000476806 PPP1R9AQ9ULJ8 1098 aa8.78□□□□□ -1
RBM39-230ENST00000476806 PCDHA12Q9UN75 941 aa8.78□□□□□ -1
RBM39-230ENST00000476806 PCDHAC2Q9Y5I4 1007 aa8.78□□□□□ -1
RBM39-230ENST00000476806 LOC102724159A0A0B4J2E5 919 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 CCDC85CA6NKD9 419 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 TPM2P07951 284 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 HSPA8P11142 646 aaKnown RBP8.77□□□□□ -1.01
RBM39-230ENST00000476806 BCRP11274 1271 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 ERCC5P28715 1186 aaPredicted RBP8.77□□□□□ -1.01
RBM39-230ENST00000476806 EPHX2P34913 555 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 SLC16A2P36021 539 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 ZNF76P36508 570 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 ARHGAP4P98171 946 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 SPAG1Q07617 926 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 PWP2Q15269 919 aaKnown RBP8.77□□□□□ -1.01
RBM39-230ENST00000476806 CAMK4Q16566 473 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 SARM1Q6SZW1 724 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 FASTKD5Q7L8L6 764 aaKnown RBP8.77□□□□□ -1.01
RBM39-230ENST00000476806 ERO1BQ86YB8 467 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 IGSF22Q8N9C0 903 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.77□□□□□ -1.015e-11■■■□□ 15.1
RBM39-230ENST00000476806 KIFC2Q96AC6 838 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 COA7Q96BR5 231 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 CTAGE1Q96RT6 745 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 GOLPH3LQ9H4A5 285 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 SLC38A10Q9HBR0 1119 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 BIN2Q9UBW5 565 aaPredicted RBP8.77□□□□□ -1.01
RBM39-230ENST00000476806 LRWD1Q9UFC0 647 aa8.77□□□□□ -1.01
RBM39-230ENST00000476806 RBBP6Q7Z6E9 1792 aaKnown RBP8.76□□□□□ -1.01
RBM39-230ENST00000476806 A0A1W2PRG0 241 aa8.76□□□□□ -1.01
RBM39-230ENST00000476806 RCCD1A6NED2 376 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms