RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 GHRP10912 638 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 TOP1P11387 765 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 GNAT2P19087 354 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CCND1P24385 295 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CLK1P49759 484 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 PDE6CP51160 858 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 RARSP54136 660 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 TUBA4AP68366 448 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 AKAP17AQ02040 695 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 ZBTB17Q13105 803 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 MTMR3Q13615 1198 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 KCTD2Q14681 263 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 RABL6Q3YEC7 729 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 ANKRD20A8PQ5CZ79 823 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 SPECC1Q5M775 1068 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 IQCEQ6IPM2 695 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 FAM117BQ6P1L5 589 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CABP7Q86V35 215 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 ZNF713Q8N859 430 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 PPP1R14CQ8TAE6 165 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CCDC110Q8TBZ0 833 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 IFT81Q8WYA0 676 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 NAF1Q96HR8 494 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 CLMNQ96JQ2 1002 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PURBQ96QR8 312 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 CDC5LQ99459 802 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 FAM167BQ9BTA0 163 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 FAM192AQ9GZU8 254 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 EPN3Q9H201 632 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 EHD4Q9H223 541 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 ZHX3Q9H4I2 956 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PPCSQ9HAB8 311 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PRM3Q9NNZ6 103 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 DDX19AQ9NUU7 478 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 RMND1Q9NWS8 449 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PCSK1NQ9UHG2 260 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 LUC7L2Q9Y383 392 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 NPHP3Q7Z494 1330 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 POLR3AO14802 1390 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 OPLAHO14841 1288 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 SPTLC2O15270 562 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 FANCGO15287 622 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 TEX28O15482 410 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 FIBPO43427 364 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 KRT14P02533 472 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ALDH2P05091 517 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ZSCAN22P10073 491 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 MYBL1P10243 752 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 XRCC5P13010 732 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 ATP2B4P23634 1241 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 VARSP26640 1264 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 KRT9P35527 623 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ZNF131P52739 623 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 VSNL1P62760 191 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 GPSM2P81274 684 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 SRSF11Q05519 484 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 MSLNQ13421 630 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 SEPT2Q15019 361 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PPP2R5BQ15173 497 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 TAF11Q15544 211 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 DDB1Q16531 1140 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 WASHC4Q2M389 1173 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 P3H1Q32P28 736 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CFAP100Q494V2 611 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 TCERG1LQ5VWI1 586 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 TBC1D9BQ66K14 1250 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CCBE1Q6UXH8 406 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 RIC3Q7Z5B4 369 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 DQX1Q8TE96 717 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.54□□□□□ -1.687e-6■■■■□ 23
CD55-208ENST00000476590 NCSTNQ92542 709 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 USP6NLQ92738 828 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CEP295NLQ96MC4 621 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 GPR101Q96P66 508 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 SRPK1Q96SB4 655 aaKnown RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 HAUS7Q99871 368 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PARVGQ9HBI0 331 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ATAD3AQ9NVI7 634 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 GTF3C4Q9UKN8 822 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 MTUS1Q9ULD2 1270 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ATAD2BQ9ULI0 1458 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 NSD2O96028 1365 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 EHBP1L1Q8N3D4 1523 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ENPP3O14638 875 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CYP1A2P05177 515 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ALADP13716 330 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PORP16435 677 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 SP100P23497 879 aaPredicted RBP4.54□□□□□ -1.68
CD55-208ENST00000476590 SCTRP47872 440 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 PRSS12P56730 875 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 GNG11P61952 73 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 COX10Q12887 443 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 BIRC3Q13489 604 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 DOC2BQ14184 412 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ME3Q16798 604 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 MUM1Q2TAK8 710 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ANKRD20A2Q5SQ80 823 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 CFAP58Q5T655 872 aa4.54□□□□□ -1.68
CD55-208ENST00000476590 ANKRD20A1Q5TYW2 823 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms