RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 RSPH10BP0C881 870 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 HOXD8P13378 290 aaPredicted RBP19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 EIF2AK2P19525 551 aaKnown RBP19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 GPM6BQ13491 265 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 EP400NLQ6ZTU2 488 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 MCF2L2Q86YR7 1114 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 DHX37Q8IY37 1157 aaKnown RBP19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 HELLSQ9NRZ9 838 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 PRKAG3Q9UGI9 489 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 FAM50BQ9Y247 325 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 MRVI1Q9Y6F6 885 aa19.25■□□□□ 0.67
APOBEC3F-203ENST00000476513 NR3C2P08235 984 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 THPOP40225 353 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 HAND2P61296 217 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 PLEKHG4Q58EX7 1191 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 ARHGEF16Q5VV41 709 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 SERINC5Q86VE9 423 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 YME1L1Q96TA2 773 aa19.24■□□□□ 0.67
APOBEC3F-203ENST00000476513 PPFIA4O75335 1185 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 HFE2Q6ZVN8 426 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 FBXO11Q86XK2 927 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 ADHFE1Q8IWW8 467 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 TMEM192Q8IY95 271 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 ADGRF4Q8IZF3 695 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 ANKS1AQ92625 1134 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 FAM227BQ96M60 508 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 NSUN3Q9H649 340 aaKnown RBP19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 PXMP2Q9NR77 195 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 SALL3Q9BXA9 1300 aa19.23■□□□□ 0.67
APOBEC3F-203ENST00000476513 HSPD1P10809 573 aaKnown RBP19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 HSDL1Q3SXM5 330 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 MYSM1Q5VVJ2 828 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 MFSD6Q6ZSS7 791 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 TBC1D10CQ8IV04 446 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 TOP1MTQ969P6 601 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 EVI5LQ96CN4 794 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 OSBPL7Q9BZF2 842 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 CLDND1Q9NY35 253 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 MRPL11Q9Y3B7 192 aaKnown RBP19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 ZMYM6O95789 1325 aa19.22■□□□□ 0.67
APOBEC3F-203ENST00000476513 A0A0D9SFI3 127 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 SORBS3O60504 671 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 RGS20O76081 388 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 UPP2O95045 317 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 PCP11498 1178 aaKnown RBP19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 IRS1P35568 1242 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 QRICH1Q2TAL8 776 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 MCMDC2Q4G0Z9 681 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 MICAL3Q7RTP6 2002 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 SEPT8Q92599 483 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 SPATA33Q96N06 139 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 ZKSCAN3Q9BRR0 538 aa19.21■□□□□ 0.67
APOBEC3F-203ENST00000476513 KIAA1217Q5T5P2 1943 aa19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 LTBRP36941 435 aa19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 CELF3Q5SZQ8 465 aaKnown RBP19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 RPAINQ86UA6 219 aa19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 ZNF589Q86UQ0 364 aaPredicted RBP19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 DGKHQ86XP1 1220 aa19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 PNMA1Q8ND90 353 aa19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 C16orf70Q9BSU1 422 aa19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 UPF3BQ9BZI7 483 aaKnown RBP19.2■□□□□ 0.66
APOBEC3F-203ENST00000476513 MYO7AQ13402 2215 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 C17orf102A2RUQ5 167 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 GGPS1O95749 300 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 CFBP00751 764 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 HOXC8P31273 242 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 ESR2Q92731 530 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 ATP6V0A1Q93050 837 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 MFSD14AQ96MC6 490 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 PDCD2LQ9BRP1 358 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 COL4A6Q14031 1691 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 ZNF318Q5VUA4 2279 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 NEDD4P46934 1319 aa19.19■□□□□ 0.66
APOBEC3F-203ENST00000476513 OPLAHO14841 1288 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 TREHO43280 583 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 NCK2O43639 380 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 CTSHP09668 335 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 MYCLP12524 364 aaPredicted RBP19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 HSD17B4P51659 736 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 SP2Q02086 613 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 SMAD2Q15796 467 aaKnown RBP19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 CTC1Q2NKJ3 1217 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 IFIH1Q9BYX4 1025 aaKnown RBP19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 RNF41Q9H4P4 317 aaPredicted RBP19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 JMJD4Q9H9V9 463 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 VAT1LQ9HCJ6 419 aa19.18■□□□□ 0.66
APOBEC3F-203ENST00000476513 DHX16O60231 1041 aaKnown RBP19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 SMIM10L2AP0DMW4 78 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 SMIM10L2BP0DMW5 78 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 UBA1P22314 1058 aaKnown RBP19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 DLX2Q07687 328 aaPredicted RBP19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 CLUL1Q15846 466 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 ASPRV1Q53RT3 343 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 HERC4Q5GLZ8 1057 aaPredicted RBP19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 KCNV1Q6PIU1 500 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 KAT14Q9H8E8 782 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 MUTYHQ9UIF7 546 aa19.17■□□□□ 0.66
APOBEC3F-203ENST00000476513 H3BRB1 525 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms