RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 TM6SF1Q9BZW5 370 aa24.32■■□□□ 1.48
LIME1-204ENST00000476183 CYP46A1Q9Y6A2 500 aa24.32■■□□□ 1.48
LIME1-204ENST00000476183 UMODL1Q5DID0 1318 aa24.32■■□□□ 1.48
LIME1-204ENST00000476183 CCDC196A0A1B0GTZ2 297 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 SPATA31C2B4DYI2 1134 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 PDIA3P30101 505 aaKnown RBP24.31■■□□□ 1.48
LIME1-204ENST00000476183 CYP2C18P33260 490 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 DGKDQ16760 1214 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 HSDL1Q3SXM5 330 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 PPP1R18Q6NYC8 613 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 NFRKBQ6P4R8 1299 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 BARHL2Q9NY43 387 aa24.31■■□□□ 1.48
LIME1-204ENST00000476183 DOCK5Q9H7D0 1870 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 HOXD8P13378 290 aaPredicted RBP24.3■■□□□ 1.48
LIME1-204ENST00000476183 NTRK3Q16288 839 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 GNPTABQ3T906 1256 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 FAM47CQ5HY64 1035 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 XRRA1Q6P2D8 792 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 SPATA33Q96N06 139 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 NOC4LQ9BVI4 516 aaKnown RBP24.3■■□□□ 1.48
LIME1-204ENST00000476183 HIPK3Q9H422 1215 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 RIC8AQ9NPQ8 531 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 PCDHA6Q9UN73 950 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 PCDHA8Q9Y5H6 950 aa24.3■■□□□ 1.48
LIME1-204ENST00000476183 ZNF286BP0CG31 522 aa24.29■■□□□ 1.48
LIME1-204ENST00000476183 CHMP4BP1P59074 171 aa24.29■■□□□ 1.48
LIME1-204ENST00000476183 PFKFB3Q16875 520 aaPredicted RBP24.29■■□□□ 1.48
LIME1-204ENST00000476183 LARP6Q9BRS8 491 aaKnown RBP24.29■■□□□ 1.48
LIME1-204ENST00000476183 NCOA5Q9HCD5 579 aaKnown RBP24.29■■□□□ 1.48
LIME1-204ENST00000476183 SMCO2A6NFE2 343 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 SPDYE3A6NKU9 549 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 hCG_1984214I3L0E3 225 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 FIBPO43427 364 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 PPFIA3O75145 1194 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 CYP2C9P11712 490 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 CSF2RAP15509 400 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 ADCY7P51828 1080 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 CCT2P78371 535 aaKnown RBP24.28■■□□□ 1.48
LIME1-204ENST00000476183 PKN1Q16512 942 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 C16orf59Q7L2K0 433 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 ZNF713Q8N859 430 aaPredicted RBP24.28■■□□□ 1.48
LIME1-204ENST00000476183 PHKBQ93100 1093 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 MLXIPQ9HAP2 919 aa24.28■■□□□ 1.48
LIME1-204ENST00000476183 PRPF3O43395 683 aaKnown RBP24.27■■□□□ 1.48
LIME1-204ENST00000476183 SCG2P13521 617 aa24.27■■□□□ 1.48
LIME1-204ENST00000476183 ITGB5P18084 799 aa24.27■■□□□ 1.48
LIME1-204ENST00000476183 PTPN11Q06124 597 aaPredicted RBP24.27■■□□□ 1.48
LIME1-204ENST00000476183 PGBD1Q96JS3 809 aa24.27■■□□□ 1.48
LIME1-204ENST00000476183 WNT8AQ9H1J5 351 aa24.27■■□□□ 1.48
LIME1-204ENST00000476183 TELO2Q9Y4R8 837 aa24.27■■□□□ 1.48
LIME1-204ENST00000476183 ADAMTS3O15072 1205 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 PPFIA4O75335 1185 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 F2P00734 622 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 SUPT20HL2P0C7V6 817 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 PSEN2P49810 448 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 PPIGQ13427 754 aaKnown RBP eCLIP24.26■■□□□ 1.476e-9■■■■□ 19.6
LIME1-204ENST00000476183 CYFIP1Q7L576 1253 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 TMEM199Q8N511 208 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 PDRG1Q9NUG6 133 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 TMEM260Q9NX78 707 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 UBIAD1Q9Y5Z9 338 aa24.26■■□□□ 1.47
LIME1-204ENST00000476183 HAS3O00219 553 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 ACRP10323 421 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 IFNAR1P17181 557 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 CLK2P49760 499 aaKnown RBP24.25■■□□□ 1.47
LIME1-204ENST00000476183 CCL23P55773 120 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 NEDD9Q14511 834 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 MFSD10Q14728 455 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 METTL7BQ6UX53 244 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 NLRX1Q86UT6 975 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 SESTD1Q86VW0 696 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 GPRASP2Q96D09 838 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 CTAGE1Q96RT6 745 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.25■■□□□ 1.472e-8■■■□□ 15.1
LIME1-204ENST00000476183 ALG1Q9BT22 464 aa24.25■■□□□ 1.47
LIME1-204ENST00000476183 ATP9AO75110 1047 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 SEC24BO95487 1268 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 KIAA0753Q2KHM9 967 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 TMEM240Q5SV17 173 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 GDF6Q6KF10 455 aaPredicted RBP24.24■■□□□ 1.47
LIME1-204ENST00000476183 TEX2Q8IWB9 1127 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 RNPC3Q96LT9 517 aaKnown RBP24.24■■□□□ 1.47
LIME1-204ENST00000476183 SENP7Q9BQF6 1050 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 C16orf70Q9BSU1 422 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 SLC26A6Q9BXS9 759 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 ANO3Q9BYT9 981 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 HDAC6Q9UBN7 1215 aa24.24■■□□□ 1.47
LIME1-204ENST00000476183 KCNA2P16389 499 aa24.23■■□□□ 1.47
LIME1-204ENST00000476183 GPR153Q6NV75 609 aa24.23■■□□□ 1.47
LIME1-204ENST00000476183 VWCEQ96DN2 955 aa24.23■■□□□ 1.47
LIME1-204ENST00000476183 ZNF274Q96GC6 653 aaPredicted RBP24.23■■□□□ 1.47
LIME1-204ENST00000476183 GPR20Q99678 358 aa24.23■■□□□ 1.47
LIME1-204ENST00000476183 KATNAL1Q9BW62 490 aa24.23■■□□□ 1.47
LIME1-204ENST00000476183 RNF26Q9BY78 433 aaPredicted RBP24.23■■□□□ 1.47
LIME1-204ENST00000476183 ESYT2A0FGR8 921 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 FOSP01100 380 aaPredicted RBP24.22■■□□□ 1.47
LIME1-204ENST00000476183 LGALS2P05162 132 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 ANAPC15P60006 121 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 PTGISQ16647 500 aa24.22■■□□□ 1.47
LIME1-204ENST00000476183 CYP2W1Q8TAV3 490 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms