RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 PBX2P40425 430 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 RCAN1P53805 252 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 PPIGQ13427 754 aaKnown RBP eCLIP13.12□□□□□ -0.317e-6■□□□□ 9.9
NUDCD3-206ENST00000475952 RTN1Q16799 776 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 FAM47CQ5HY64 1035 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 VSIG10LQ86VR7 867 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 TMEM199Q8N511 208 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 EMID1Q96A84 441 aaPredicted RBP13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 JAKMIP1Q96N16 626 aaKnown RBP13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■□□□□ 9.6
NUDCD3-206ENST00000475952 PRDM12Q9H4Q4 367 aa13.12□□□□□ -0.31
NUDCD3-206ENST00000475952 PTPRSQ13332 1948 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 LOXHD1Q8IVV2 1947 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 KLF18A0A0U1RQI7 1052 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 GOLGA8AA7E2F4 631 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 GOLGA8BA8MQT2 603 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 PIK3CDO00329 1044 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 B4GALT4O60513 344 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 CASTP20810 708 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 MRPS5P82675 430 aaKnown RBP13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 PTPN11Q06124 597 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 ADGRE1Q14246 886 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 NFRKBQ6P4R8 1299 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 BLOC1S2Q6QNY1 142 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 CCDC82Q8N4S0 544 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 IL31RAQ8NI17 732 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 AFG1LQ8WV93 481 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 KCNB2Q92953 911 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 PBX4Q9BYU1 374 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 ALDH8A1Q9H2A2 487 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 HIPK3Q9H422 1215 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 NAP1L2Q9ULW6 460 aaPredicted RBP13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 SNX14Q9Y5W7 946 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 MUC6Q6W4X9 2439 aa13.11□□□□□ -0.31
NUDCD3-206ENST00000475952 GRXCR1A8MXD5 290 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 TGFB3P10600 412 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 PSMA5P28066 241 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 DGKDQ16760 1214 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 RASIP1Q5U651 963 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 PSRC1Q6PGN9 363 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 USP17L6PQ6QN14 398 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 DHX37Q8IY37 1157 aaKnown RBP13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 NECAB3Q96P71 396 aaPredicted RBP13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 KATNAL1Q9BW62 490 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 BRPF3Q9ULD4 1205 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 MICAL3Q7RTP6 2002 aa13.1□□□□□ -0.31
NUDCD3-206ENST00000475952 WDFY4Q6ZS81 3184 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 CCDC196A0A1B0GTZ2 297 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 hCG_1642624A0A1W2PR95 340 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 SPDYE3A6NKU9 549 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 hCG_1984214I3L0E3 225 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 MEIS2O14770 477 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 RGS20O76081 388 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 GGPS1O95749 300 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 CSF2RAP15509 400 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 UBA1P22314 1058 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 METAP2P50579 478 aaKnown RBP eCLIP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 CHMP4BP1P59074 171 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 CCDC85BQ15834 202 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 NBPF20Q3BBV1 942 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 PCNX4Q63HM2 1172 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 XRRA1Q6P2D8 792 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 Q6ZUG5 572 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 C16orf59Q7L2K0 433 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 ZNF713Q8N859 430 aaPredicted RBP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 GPKOWQ92917 476 aaPredicted RBP eCLIP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 NOC4LQ9BVI4 516 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 TRPV6Q9H1D0 765 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 PSTPIP2Q9H939 334 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 TRMT13Q9NUP7 481 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 NOD1Q9Y239 953 aa13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 PRRC2BQ5JSZ5 2229 aaKnown RBP13.09□□□□□ -0.31
NUDCD3-206ENST00000475952 NID2Q14112 1375 aa13.08□□□□□ -0.31
NUDCD3-206ENST00000475952 FIBPO43427 364 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 CPA1P15085 419 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 RPS6KB1P23443 525 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 ICAM3P32942 547 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 CYP2C18P33260 490 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 NAPAP54920 295 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 TMEM240Q5SV17 173 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 CELF3Q5SZQ8 465 aaKnown RBP13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 MYSM1Q5VVJ2 828 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 TEX2Q8IWB9 1127 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 BRF1Q92994 677 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 SPATA33Q96N06 139 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 INPP4AQ96PE3 977 aaPredicted RBP13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 EHMT1Q9H9B1 1298 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 MLXIPQ9HAP2 919 aa13.08□□□□□ -0.32
NUDCD3-206ENST00000475952 SIP14410 1827 aa13.07□□□□□ -0.32
NUDCD3-206ENST00000475952 NOP56O00567 594 aaKnown RBP13.07□□□□□ -0.32
NUDCD3-206ENST00000475952 F2P00734 622 aa13.07□□□□□ -0.32
NUDCD3-206ENST00000475952 ZNF286BP0CG31 522 aa13.07□□□□□ -0.32
NUDCD3-206ENST00000475952 MRPS9P82933 396 aaKnown RBP13.07□□□□□ -0.32
NUDCD3-206ENST00000475952 APOBRQ0VD83 1088 aa13.07□□□□□ -0.32
NUDCD3-206ENST00000475952 NEDD9Q14511 834 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms