RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TGFB3P10600 412 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 HOXD8P13378 290 aaPredicted RBP12.58□□□□□ -0.4
CDRT1-205ENST00000475944 DEFB103AP81534 67 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 TRDNQ13061 729 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 PGM5Q15124 567 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 SEC23AQ15436 765 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 CELF3Q5SZQ8 465 aaKnown RBP12.58□□□□□ -0.4
CDRT1-205ENST00000475944 MYSM1Q5VVJ2 828 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 HLA-CQ95604 372 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 SPATA33Q96N06 139 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 RAD9AQ99638 391 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 C1QTNF1Q9BXJ1 281 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 LMCD1Q9NZU5 365 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 MAD2L2Q9UI95 211 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 EMSYQ7Z589 1322 aa12.58□□□□□ -0.4
CDRT1-205ENST00000475944 PALM3A6NDB9 673 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-205ENST00000475944 LPXNO60711 386 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 PPP1R11O60927 126 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-205ENST00000475944 RGS20O76081 388 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 CCND2P30279 289 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 HOXA13P31271 388 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-205ENST00000475944 TRIM71Q2Q1W2 868 aaKnown RBP12.57□□□□□ -0.4
CDRT1-205ENST00000475944 HSDL1Q3SXM5 330 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 ZNF618Q5T7W0 954 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 TMCO2Q7Z6W1 182 aaPredicted RBP12.57□□□□□ -0.4
CDRT1-205ENST00000475944 VSIG10LQ86VR7 867 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 HOMER1Q86YM7 354 aa12.57□□□□□ -0.4
CDRT1-205ENST00000475944 TGS1Q96RS0 853 aaKnown RBP12.57□□□□□ -0.4
CDRT1-205ENST00000475944 PRRC2BQ5JSZ5 2229 aaKnown RBP12.56□□□□□ -0.4
CDRT1-205ENST00000475944 ERICH2A1L162 156 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 GCOM1H8Y6P7 765 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-205ENST00000475944 SORBS3O60504 671 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 LGR5O75473 907 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 POLR2MP0CAP2 368 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 UBA1P22314 1058 aaKnown RBP12.56□□□□□ -0.4
CDRT1-205ENST00000475944 ERVK-21P61565 698 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 ZNF200P98182 395 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-205ENST00000475944 TRAF7Q6Q0C0 670 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 CYB5R4Q7L1T6 521 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 SPRED2Q7Z698 418 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 GDPD5Q8WTR4 605 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 RIOX1Q9H6W3 641 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
CDRT1-205ENST00000475944 U3KPZ7 1027 aaPredicted RBP12.56□□□□□ -0.4
CDRT1-205ENST00000475944 TCF20Q9UGU0 1960 aaKnown RBP12.56□□□□□ -0.4
CDRT1-205ENST00000475944 MYH7BA7E2Y1 1941 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 C17orf102A2RUQ5 167 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 LINC01553A4QN01 128 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 RSPH10B2B2RC85 870 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 IFIT3O14879 490 aaKnown RBP12.55□□□□□ -0.4
CDRT1-205ENST00000475944 RSPH10BP0C881 870 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 SP2Q02086 613 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 GRM4Q14833 912 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 SART3Q15020 963 aaKnown RBP12.55□□□□□ -0.4
CDRT1-205ENST00000475944 TCTN1Q2MV58 587 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 GNPTABQ3T906 1256 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 RALYLQ86SE5 291 aaKnown RBP12.55□□□□□ -0.4
CDRT1-205ENST00000475944 SERINC5Q86VE9 423 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 FCHSD1Q86WN1 690 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 IL31RAQ8NI17 732 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 RUFY2Q8WXA3 655 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 WNT8BQ93098 351 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 PIGSQ96S52 555 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 IL25Q9H293 177 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 SUGCTQ9HAC7 445 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 MTUS1Q9ULD2 1270 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 INSL6Q9Y581 213 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 TRANK1O15050 2925 aa12.55□□□□□ -0.4
CDRT1-205ENST00000475944 PNMA6FA0A0J9YX94 578 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 H3BRB1 525 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 NOP56O00567 594 aaKnown RBP12.54□□□□□ -0.4
CDRT1-205ENST00000475944 STAM2O75886 525 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 AMHP03971 560 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 THPOP40225 353 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 MBTPS1Q14703 1052 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 DBF4BQ8NFT6 615 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 EXOC6Q8TAG9 804 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 USP26Q9BXU7 913 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
CDRT1-205ENST00000475944 REV3LO60673 3130 aa12.54□□□□□ -0.4
CDRT1-205ENST00000475944 XIRP2A4UGR9 3374 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 SIP14410 1827 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 CAND2O75155 1236 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 LGALS2P05162 132 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 SMIM10L2AP0DMW4 78 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 SMIM10L2BP0DMW5 78 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 GNAT1P11488 350 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 HOXC8P31273 242 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 NEDD9Q14511 834 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 HIC1Q14526 733 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 WTAPQ15007 396 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 SLC35G1Q2M3R5 365 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 PLEKHG4Q58EX7 1191 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 FBXO22Q8NEZ5 403 aa12.53□□□□□ -0.4
CDRT1-205ENST00000475944 GPKOWQ92917 476 aaPredicted RBP eCLIP12.53□□□□□ -0.4
CDRT1-205ENST00000475944 ZFP91Q96JP5 570 aaPredicted RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms