RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 ASB2Q96Q27 587 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 IWS1Q96ST2 819 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 RMDN3Q96TC7 470 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 KRT23Q9C075 422 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 JMJD4Q9H9V9 463 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 ZSWIM5Q9P217 1185 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 CTNNA3Q9UI47 895 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 NOD1Q9Y239 953 aa8.4□□□□□ -1.06
UBE4B-208ENST00000475795 MRPL11Q9Y3B7 192 aaKnown RBP8.4□□□□□ -1.06
UBE4B-208ENST00000475795 DOCK5Q9H7D0 1870 aa8.4□□□□□ -1.07
UBE4B-208ENST00000475795 SIP14410 1827 aa8.4□□□□□ -1.07
UBE4B-208ENST00000475795 DHX16O60231 1041 aaKnown RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 BAIAP3O94812 1187 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 CA3P07451 260 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 EIF2AK2P19525 551 aaKnown RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 CASTP20810 708 aaKnown RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 EMP3P54852 163 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 MRPS5P82675 430 aaKnown RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 GHRHRQ02643 423 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 PTGISQ16647 500 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 ARSIQ5FYB1 569 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 ARHGEF16Q5VV41 709 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 GDF6Q6KF10 455 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 CCDC155Q8N6L0 562 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 AFAP1L1Q8TED9 768 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 EMID1Q96A84 441 aaPredicted RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 CTAGE1Q96RT6 745 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 UBAC1Q9BSL1 405 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 FTOQ9C0B1 505 aaKnown RBP eCLIP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 CNNM2Q9H8M5 875 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 PXMP2Q9NR77 195 aa8.39□□□□□ -1.07
UBE4B-208ENST00000475795 DDX41Q9UJV9 622 aaKnown RBP8.39□□□□□ -1.07
UBE4B-208ENST00000475795 OPLAHO14841 1288 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 EIF3JO75822 258 aaKnown RBP8.38□□□□□ -1.07
UBE4B-208ENST00000475795 CFBP00751 764 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 NR3C2P08235 984 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 POU3F3P20264 500 aaPredicted RBP8.38□□□□□ -1.07
UBE4B-208ENST00000475795 HSD17B4P51659 736 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 CHMP4BP1P59074 171 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 RBL2Q08999 1139 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 MFSD10Q14728 455 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 SEC23AQ15436 765 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 DGKDQ16760 1214 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 IFIT1BQ5T764 474 aaKnown RBP8.38□□□□□ -1.07
UBE4B-208ENST00000475795 CHST3Q7LGC8 479 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 HERC6Q8IVU3 1022 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 MICALL1Q8N3F8 863 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 STAG2Q8N3U4 1231 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 PPTC7Q8NI37 304 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 EXOC6Q8TAG9 804 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 ADAMTS19Q8TE59 1207 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 DHX38Q92620 1227 aaKnown RBP8.38□□□□□ -1.07
UBE4B-208ENST00000475795 MTMR8Q96EF0 704 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 KATNAL1Q9BW62 490 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 AMNQ9BXJ7 453 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 IL25Q9H293 177 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 VAT1LQ9HCJ6 419 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 GTF2IRD1Q9UHL9 959 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 MRVI1Q9Y6F6 885 aa8.38□□□□□ -1.07
UBE4B-208ENST00000475795 TRANK1O15050 2925 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 REV3LO60673 3130 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 PALM3A6NDB9 673 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 EPOPA6NHQ4 379 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 KIF28PB7ZC32 967 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 KLRF2D3W0D1 207 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 HAS3O00219 553 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 RFXAPO00287 272 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 ZBTB5O15062 677 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 PPP1R11O60927 126 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 ARHGEF15O94989 841 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 PARNO95453 639 aaKnown RBP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 F2P00734 622 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 CXCL10P02778 98 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 ZNF286BP0CG31 522 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 HOXD8P13378 290 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 SELPP16109 830 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 KCNJ6P48051 423 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 PSEN2P49810 448 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 TAP1Q03518 808 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 LAMC2Q13753 1193 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 GPNMBQ14956 572 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 TPRNQ4KMQ1 711 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 CNKSR3Q6P9H4 555 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 STOX1Q6ZVD7 989 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 CYB5R4Q7L1T6 521 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 LRRC8DQ7L1W4 858 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 SAMD3Q8N6K7 520 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 IL27Q8NEV9 243 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 KHSRPQ92945 711 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 UHRF1Q96T88 793 aaPredicted RBP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 PDCD2LQ9BRP1 358 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 CERS4Q9HA82 394 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 MAP3K20Q9NYL2 800 aaKnown RBP8.37□□□□□ -1.07
UBE4B-208ENST00000475795 HDAC6Q9UBN7 1215 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 MAD2L2Q9UI95 211 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 MTCH2Q9Y6C9 303 aa8.37□□□□□ -1.07
UBE4B-208ENST00000475795 NLRC5Q86WI3 1866 aa8.36□□□□□ -1.07
UBE4B-208ENST00000475795 TLL1O43897 1013 aa8.36□□□□□ -1.07
UBE4B-208ENST00000475795 NBNO60934 754 aa8.36□□□□□ -1.07
UBE4B-208ENST00000475795 RGS20O76081 388 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms