RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 SMAD3P84022 425 aaKnown RBP17.93■□□□□ 0.46
CPSF3-203ENST00000475482 PPIGQ13427 754 aaKnown RBP eCLIP17.93■□□□□ 0.46
CPSF3-203ENST00000475482 NBPF20Q3BBV1 942 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 RASIP1Q5U651 963 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 NFRKBQ6P4R8 1299 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 CPLX2Q6PUV4 134 aaKnown RBP17.93■□□□□ 0.46
CPSF3-203ENST00000475482 TMTC3Q6ZXV5 915 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 TMEM199Q8N511 208 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 DEFB123Q8N688 67 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 AFG1LQ8WV93 481 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 MTMR10Q9NXD2 777 aa17.93■□□□□ 0.46
CPSF3-203ENST00000475482 GOLGA8BA8MQT2 603 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 MEIS2O14770 477 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 LARGE1O95461 756 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 TGFB3P10600 412 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 CSF2RAP15509 400 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 PDCP20941 246 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 CYP2C18P33260 490 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 PTPN11Q06124 597 aaPredicted RBP17.92■□□□□ 0.46
CPSF3-203ENST00000475482 STK3Q13188 491 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 TMEM240Q5SV17 173 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 KCNV1Q6PIU1 500 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 APOA5Q6Q788 366 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 Q7L0L9 218 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 KAT2BQ92831 832 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.92■□□□□ 0.46
CPSF3-203ENST00000475482 PPP1R12CQ9BZL4 782 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 HIPK3Q9H422 1215 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 UMODL1Q5DID0 1318 aa17.92■□□□□ 0.46
CPSF3-203ENST00000475482 CCDC196A0A1B0GTZ2 297 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 ZBTB43O43298 467 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 CDKL5O76039 1030 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 SUPT20HL2P0C7V6 817 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 MRPS9P82933 396 aaKnown RBP17.91■□□□□ 0.46
CPSF3-203ENST00000475482 HMGN5P82970 282 aaKnown RBP17.91■□□□□ 0.46
CPSF3-203ENST00000475482 SP2Q02086 613 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 FUT2Q10981 343 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 LAMC2Q13753 1193 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 SESTD1Q86VW0 696 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 FCHSD1Q86WN1 690 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 CMTR1Q8N1G2 835 aaKnown RBP17.91■□□□□ 0.46
CPSF3-203ENST00000475482 NECAB1Q8N987 351 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 PPTC7Q8NI37 304 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 PIBF1Q8WXW3 757 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 VWCEQ96DN2 955 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 RNPC3Q96LT9 517 aaKnown RBP17.91■□□□□ 0.46
CPSF3-203ENST00000475482 WNT8AQ9H1J5 351 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 TRMT13Q9NUP7 481 aaKnown RBP17.91■□□□□ 0.46
CPSF3-203ENST00000475482 BRPF3Q9ULD4 1205 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 MRVI1Q9Y6F6 885 aa17.91■□□□□ 0.46
CPSF3-203ENST00000475482 TRIP12Q14669 1992 aaPredicted RBP17.91■□□□□ 0.46
CPSF3-203ENST00000475482 CPLX1O14810 134 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 STAM2O75886 525 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 MYCLP12524 364 aaPredicted RBP17.9■□□□□ 0.46
CPSF3-203ENST00000475482 CCND2P30279 289 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 ICAM3P32942 547 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 METAP2P50579 478 aaKnown RBP eCLIP17.9■□□□□ 0.46
CPSF3-203ENST00000475482 MYSM1Q5VVJ2 828 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 MICU3Q86XE3 530 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 RAB11FIP4Q86YS3 637 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 INPP4AQ96PE3 977 aaPredicted RBP17.9■□□□□ 0.46
CPSF3-203ENST00000475482 IL23AQ9NPF7 189 aa17.9■□□□□ 0.46
CPSF3-203ENST00000475482 SEC63Q9UGP8 760 aaKnown RBP17.9■□□□□ 0.46
CPSF3-203ENST00000475482 SCRN1Q12765 414 aa17.89■□□□□ 0.45
CPSF3-203ENST00000475482 DGKDQ16760 1214 aa17.89■□□□□ 0.45
CPSF3-203ENST00000475482 CELF3Q5SZQ8 465 aaKnown RBP17.89■□□□□ 0.45
CPSF3-203ENST00000475482 USP17L6PQ6QN14 398 aa17.89■□□□□ 0.45
CPSF3-203ENST00000475482 CTAGE1Q96RT6 745 aa17.89■□□□□ 0.45
CPSF3-203ENST00000475482 FAM217BQ9NTX9 383 aaPredicted RBP17.89■□□□□ 0.45
CPSF3-203ENST00000475482 RBM28Q9NW13 759 aaKnown RBP17.89■□□□□ 0.45
CPSF3-203ENST00000475482 SCN5AQ14524 2016 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 HAS3O00219 553 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 PPFIA4O75335 1185 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 F2P00734 622 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 CYP2C9P11712 490 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 UBA1P22314 1058 aaKnown RBP17.88■□□□□ 0.45
CPSF3-203ENST00000475482 GJB2P29033 226 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 SEMA3FQ13275 785 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 XRRA1Q6P2D8 792 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 PSRC1Q6PGN9 363 aaPredicted RBP17.88■□□□□ 0.45
CPSF3-203ENST00000475482 ZNF365Q70YC5 407 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 DHX37Q8IY37 1157 aaKnown RBP17.88■□□□□ 0.45
CPSF3-203ENST00000475482 GPKOWQ92917 476 aaPredicted RBP eCLIP17.88■□□□□ 0.45
CPSF3-203ENST00000475482 CNTNAP5Q8WYK1 1306 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 NID2Q14112 1375 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 DOCK5Q9H7D0 1870 aa17.88■□□□□ 0.45
CPSF3-203ENST00000475482 TET1Q8NFU7 2136 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 CDH23Q9H251 3354 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 TANC1Q9C0D5 1861 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.87■□□□□ 0.45
CPSF3-203ENST00000475482 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.87■□□□□ 0.45
CPSF3-203ENST00000475482 GOLGA8AA7E2F4 631 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 SPATA31C2B4DYI2 1134 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 ACRP10323 421 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 CCT2P78371 535 aaKnown RBP17.87■□□□□ 0.45
CPSF3-203ENST00000475482 HSDL1Q3SXM5 330 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 PCNX4Q63HM2 1172 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 TEX2Q8IWB9 1127 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 FAM184AQ8NB25 1140 aa17.87■□□□□ 0.45
CPSF3-203ENST00000475482 HERVK_113Q902F9 699 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms