RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 MICU3Q86XE3 530 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 CCDC82Q8N4S0 544 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 TMEM199Q8N511 208 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 SLC43A3Q8NBI5 491 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 AFG1LQ8WV93 481 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 RNPC3Q96LT9 517 aaKnown RBP10.89□□□□□ -0.67
PDPN-204ENST00000475043 TCEANC2Q96MN5 208 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 LZTS2Q9BRK4 669 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 PDCD2LQ9BRP1 358 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 SEZ6LQ9BYH1 1024 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 HIPK3Q9H422 1215 aa10.89□□□□□ -0.67
PDPN-204ENST00000475043 LAMA3Q16787 3333 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 A6NJR5 290 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 CSF2RAP15509 400 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 SMARCA1P28370 1054 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 CCND2P30279 289 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 CYP2C18P33260 490 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 FGD1P98174 961 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 GHRHRQ02643 423 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 PPIGQ13427 754 aaKnown RBP eCLIP10.88□□□□□ -0.67
PDPN-204ENST00000475043 KRT32Q14532 448 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 NBPF20Q3BBV1 942 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 ADCK5Q3MIX3 580 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 SRBD1Q8N5C6 995 aaKnown RBP10.88□□□□□ -0.67
PDPN-204ENST00000475043 FANCBQ8NB91 859 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 SMARCC2Q8TAQ2 1214 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 PPP1R13LQ8WUF5 828 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 CUL5Q93034 780 aa10.88□□□□□ -0.67
PDPN-204ENST00000475043 ALDH8A1Q9H2A2 487 aaPredicted RBP10.88□□□□□ -0.67
PDPN-204ENST00000475043 TRMT13Q9NUP7 481 aaKnown RBP10.88□□□□□ -0.67
PDPN-204ENST00000475043 DDX41Q9UJV9 622 aaKnown RBP10.88□□□□□ -0.67
PDPN-204ENST00000475043 hCG_1642624A0A1W2PR95 340 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 SORBS3O60504 671 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 MMP3P08254 477 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 SUPT20HL2P0C7V6 817 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 ACRP10323 421 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 CCL23P55773 120 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 ARHGAP1Q07960 439 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 KCNV1Q6PIU1 500 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 DHX32Q7L7V1 743 aaKnown RBP10.87□□□□□ -0.67
PDPN-204ENST00000475043 VSIG10LQ86VR7 867 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 SGMS1Q86VZ5 419 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 PLPP6Q8IY26 295 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 DHX37Q8IY37 1157 aaKnown RBP10.87□□□□□ -0.67
PDPN-204ENST00000475043 IL31RAQ8NI17 732 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 FAM161BQ96MY7 647 aa10.87□□□□□ -0.67
PDPN-204ENST00000475043 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.87□□□□□ -0.67
PDPN-204ENST00000475043 NAP1L2Q9ULW6 460 aaPredicted RBP10.87□□□□□ -0.67
PDPN-204ENST00000475043 UMODL1Q5DID0 1318 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 ZBTB43O43298 467 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 RGS20O76081 388 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
PDPN-204ENST00000475043 CYP2C9P11712 490 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 CASTP20810 708 aaKnown RBP10.86□□□□□ -0.67
PDPN-204ENST00000475043 EXOSC10Q01780 885 aaKnown RBP10.86□□□□□ -0.67
PDPN-204ENST00000475043 LAMC2Q13753 1193 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 DSG2Q14126 1118 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 DGKDQ16760 1214 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 TSGA10IPQ3SY00 556 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 ZNF697Q5TEC3 545 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 NFRKBQ6P4R8 1299 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 APOA5Q6Q788 366 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 USP17L6PQ6QN14 398 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 TMTC3Q6ZXV5 915 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 HEATR3Q7Z4Q2 680 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 PTCD2Q8WV60 388 aaKnown RBP10.86□□□□□ -0.67
PDPN-204ENST00000475043 RTEL1Q9NZ71 1219 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 LHX6Q9UPM6 363 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 NOD1Q9Y239 953 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 SCN10AQ9Y5Y9 1956 aa10.86□□□□□ -0.67
PDPN-204ENST00000475043 DOCK5Q9H7D0 1870 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 KLF18A0A0U1RQI7 1052 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 REC8O95072 547 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 GGPS1O95749 300 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 CPA1P15085 419 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 RTN1Q16799 776 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 GNPTABQ3T906 1256 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 ZNF365Q70YC5 407 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 SCLYQ96I15 445 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 SPATA33Q96N06 139 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 JAKMIP1Q96N16 626 aaKnown RBP10.85□□□□□ -0.67
PDPN-204ENST00000475043 ALG1Q9BT22 464 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 NOC4LQ9BVI4 516 aaKnown RBP10.85□□□□□ -0.67
PDPN-204ENST00000475043 PSTPIP2Q9H939 334 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 MLXIPQ9HAP2 919 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 IL23AQ9NPF7 189 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 RBM28Q9NW13 759 aaKnown RBP10.85□□□□□ -0.67
PDPN-204ENST00000475043 MTMR10Q9NXD2 777 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 BRPF3Q9ULD4 1205 aa10.85□□□□□ -0.67
PDPN-204ENST00000475043 GOLGA8AA7E2F4 631 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 GOLGA8BA8MQT2 603 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 PIK3CDO00329 1044 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 MEIS2O14770 477 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 STAM2O75886 525 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 ZNF286BP0CG31 522 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 TGFB3P10600 412 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 UBA1P22314 1058 aaKnown RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 HSPA4P34932 840 aa10.84□□□□□ -0.67
PDPN-204ENST00000475043 MRPS9P82933 396 aaKnown RBP10.84□□□□□ -0.67
PDPN-204ENST00000475043 SMAD3P84022 425 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms