RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PPARAQ07869 468 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 MAN2A1Q16706 1144 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 SLC9C1Q4G0N8 1177 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 PREPLQ4J6C6 727 aaPredicted RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 HSP90AA4PQ58FG1 418 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 CEP85LQ5SZL2 805 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 TMTC3Q6ZXV5 915 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 HOOK3Q86VS8 718 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 CREG2Q8IUH2 290 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 IQCKQ8N0W5 287 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 VGLL2Q8N8G2 317 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 GBP7Q8N8V2 638 aaPredicted RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 TNFRSF25Q93038 417 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 CENPTQ96BT3 561 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 RSRC1Q96IZ7 334 aaKnown RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 NAP1L3Q99457 506 aaPredicted RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 P2RX7Q99572 595 aaKnown RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 NAP1L4Q99733 375 aaKnown RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 C7orf25Q9BPX7 421 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 NOC4LQ9BVI4 516 aaKnown RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 NSRP1Q9H0G5 558 aaKnown RBP8.85□□□□□ -0.99
CCDC93-208ENST00000474546 PRO3102Q9H379 93 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 TOMM22Q9NS69 142 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 KLC4Q9NSK0 619 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 KBTBD4Q9NVX7 518 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 KCNJ14Q9UNX9 436 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 PCDHA13Q9Y5I0 950 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 SLC4A4Q9Y6R1 1079 aa8.85□□□□□ -0.99
CCDC93-208ENST00000474546 TNKSO95271 1327 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 CCDC194A0A1B0GVG4 234 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 GSG1L2A8MUP6 293 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 NBPF26B4DH59 902 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 TNFRSF10AO00220 468 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 GFPT2O94808 682 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 MBD4O95243 580 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 ITGA6P23229 1130 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SMARCA1P28370 1054 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 ADORA1P30542 326 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 HSPA9P38646 679 aaKnown RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 PRCPP42785 496 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 MAGEA1P43355 309 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 NR5A1Q13285 461 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SEC23AQ15436 765 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 ZKSCAN8Q15776 578 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 PTGISQ16647 500 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 PFKFB3Q16875 520 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 FER1L6Q2WGJ9 1857 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 LACTB2Q53H82 288 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SPECC1Q5M775 1068 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 WLSQ5T9L3 541 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 GKAP1Q5VSY0 366 aaPredicted RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 RCSD1Q6JBY9 416 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 TTI2Q6NXR4 508 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 NBPF10Q6P3W6 841 aaKnown RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 WDR59Q6PJI9 974 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 MAATS1Q7Z4T9 603 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 VPS36Q86VN1 386 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SYCE1Q8N0S2 351 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 PLCD3Q8N3E9 789 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 CCDC26Q8TAB7 109 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 TBC1D22AQ8WUA7 517 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 NUP133Q8WUM0 1156 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 HOOK2Q96ED9 719 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 CALML4Q96GE6 196 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SGSM3Q96HU1 749 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 LRCH3Q96II8 777 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 EPSTI1Q96J88 318 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 KDM4CQ9H3R0 1056 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SLITRK6Q9H5Y7 841 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 SUGCTQ9HAC7 445 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 ATP6V0A4Q9HBG4 840 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 ZNF287Q9HBT7 754 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 GJB4Q9NTQ9 266 aa8.84□□□□□ -0.99
CCDC93-208ENST00000474546 REXO2Q9Y3B8 237 aaKnown RBP8.84□□□□□ -0.99
CCDC93-208ENST00000474546 DUOX1Q9NRD9 1551 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 GMNCA6NCL1 334 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 RGL2O15211 777 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CYP27B1O15528 508 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 LUC7L3O95232 432 aaKnown RBP8.83□□□□□ -1
CCDC93-208ENST00000474546 SERPING1P05155 500 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 GCFC2P16383 781 aaKnown RBP8.83□□□□□ -1
CCDC93-208ENST00000474546 FGFR2P21802 821 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 FNTAP49354 379 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 KIF11P52732 1056 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 IRX1P78414 480 aaPredicted RBP8.83□□□□□ -1
CCDC93-208ENST00000474546 CTDSPL2Q05D32 466 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 RIPK1Q13546 671 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CCDC38Q502W7 563 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 NAA35Q5VZE5 725 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 KRT25Q7Z3Z0 450 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 NLRP14Q86W24 1093 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 GRAMD1CQ8IYS0 662 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CACNA2D3Q8IZS8 1091 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 BLIDQ8IZY5 108 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 TTLL6Q8N841 843 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 TTLL11Q8NHH1 800 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CFAP61Q8NHU2 1237 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 ZCRB1Q8TBF4 217 aaKnown RBP8.83□□□□□ -1
CCDC93-208ENST00000474546 CAPZA3Q96KX2 299 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CCDC114Q96M63 670 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms