RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 IWS1Q96ST2 819 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 ZNF576Q9H609 170 aa10.21□□□□□ -0.77
TNFRSF9-202ENST00000474475 GBF1Q92538 1859 aa10.21□□□□□ -0.78
TNFRSF9-202ENST00000474475 IFIT3O14879 490 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 ZBTB5O15062 677 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 CYTH3O43739 400 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 GH1P01241 217 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 NR3C2P08235 984 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 MMP3P08254 477 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 EMP3P54852 163 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 ANTXR2P58335 489 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 TROAPQ12815 778 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 ARHGEF16Q5VV41 709 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 NFRKBQ6P4R8 1299 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 HOMER1Q86YM7 354 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 NCOA7Q8NI08 942 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 MAP4K1Q92918 833 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 PIGSQ96S52 555 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 RIOX1Q9H6W3 641 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 PXMP2Q9NR77 195 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 DDX41Q9UJV9 622 aaKnown RBP10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 PCDHA1Q9Y5I3 950 aa10.2□□□□□ -0.78
TNFRSF9-202ENST00000474475 SCN5AQ14524 2016 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 TANC1Q9C0D5 1861 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 EIF3JO75822 258 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 RGS20O76081 388 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 HOXA13P31271 388 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 CHMP4BP1P59074 171 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 PTPN11Q06124 597 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 WTAPQ15007 396 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 RALYLQ86SE5 291 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 MB21D2Q8IYB1 491 aaPredicted RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 RPUSD2Q8IZ73 545 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 KAT2BQ92831 832 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 CTAGE1Q96RT6 745 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 PDCD2LQ9BRP1 358 aa10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 MTIF3Q9H2K0 278 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 YBX2Q9Y2T7 364 aaKnown RBP10.19□□□□□ -0.78
TNFRSF9-202ENST00000474475 ERICH2A1L162 156 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 MYCLP12524 364 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 RABGGTBP53611 331 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 PGM5Q15124 567 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 RAB30Q15771 203 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 TMEM67Q5HYA8 995 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 DEFB128Q7Z7B8 93 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 IL31RAQ8NI17 732 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 IGDCC4Q8TDY8 1250 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 EMID1Q96A84 441 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 NKX2-4Q9H2Z4 354 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 PRDM12Q9H4Q4 367 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 MAP3K20Q9NYL2 800 aaKnown RBP10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 RBM8AQ9Y5S9 174 aaKnown RBP10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 MRVI1Q9Y6F6 885 aa10.18□□□□□ -0.78
TNFRSF9-202ENST00000474475 PNMA6FA0A0J9YX94 578 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 ZBBXA8MT70 800 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 PFKMP08237 780 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 IQCF3P0C7M6 154 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 MYOGP15173 224 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 CASTP20810 708 aaKnown RBP10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 COL9A3Q14050 684 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 SART3Q15020 963 aaKnown RBP10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 PTGISQ16647 500 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 GDF6Q6KF10 455 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 VSIG10LQ86VR7 867 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 SESTD1Q86VW0 696 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 SAMD3Q8N6K7 520 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 USP38Q8NB14 1042 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 MYL10Q9BUA6 226 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 LSG1Q9H089 658 aaKnown RBP10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 MSRAQ9UJ68 235 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 SLC4A7Q9Y6M7 1214 aa10.17□□□□□ -0.78
TNFRSF9-202ENST00000474475 MYH7BA7E2Y1 1941 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 GCOM1H8Y6P7 765 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 SORBS3O60504 671 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 POLR2MP0CAP2 368 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 ZNF286BP0CG31 522 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 HOXD8P13378 290 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 RFC2P35250 354 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 PSEN2P49810 448 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 SP2Q02086 613 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 TRAF1Q13077 416 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 BFSP2Q13515 415 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 LAMC2Q13753 1193 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 ADGRE1Q14246 886 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 DGKDQ16760 1214 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 HSDL1Q3SXM5 330 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 MYSM1Q5VVJ2 828 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 CATIPQ7Z7H3 387 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 FCHSD1Q86WN1 690 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 DHX37Q8IY37 1157 aaKnown RBP10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 ZNF654Q8IZM8 581 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 RETREG2Q8NC44 543 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 PPTC7Q8NI37 304 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 PIBF1Q8WXW3 757 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 DHX38Q92620 1227 aaKnown RBP10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 GPKOWQ92917 476 aaPredicted RBP eCLIP10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 ALG1Q9BT22 464 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 SLC28A3Q9HAS3 691 aa10.16□□□□□ -0.78
TNFRSF9-202ENST00000474475 LY9Q9HBG7 655 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms