RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 TSPY3P0CV98 308 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 TSPY8P0CW00 308 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 GZMAP12544 262 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 GNAT2P19087 354 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 KCNA3P22001 575 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 BMP8BP34820 402 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 HOXD12P35452 270 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 CTAG1AP78358 180 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 TSPY1Q01534 308 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 RAB33AQ14088 237 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 ANKRD1Q15327 319 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 C1orf228Q6PIY5 440 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 ANKS3Q6ZW76 656 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 RAPH1Q70E73 1250 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 OTOP3Q7RTS5 596 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 LURAP1LQ8IV03 231 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 IPO9Q96P70 1041 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 TSGA13Q96PP4 275 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 UHRF1Q96T88 793 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 ASPSCR1Q9BZE9 553 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 CCDC68Q9H2F9 335 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 OSBPL3Q9H4L5 887 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 ALG13Q9NP73 1137 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 STARD7Q9NQZ5 370 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 MRPL11Q9Y3B7 192 aaKnown RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 BTAF1O14981 1849 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 PLOD2O00469 737 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 TREHO43280 583 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 STAMBPO95630 424 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 APBB3O95704 486 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 CYP17A1P05093 508 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 SSBP05455 408 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 MATR3P43243 847 aaKnown RBP eCLIP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 GTF2A2P52657 109 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 AP2B1P63010 937 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 POSTNQ15063 836 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 RABEP1Q15276 862 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 BTNL9Q6UXG8 535 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 ARHGEF18Q6ZSZ5 1173 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 LRRC43Q8N309 656 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 CARNMT1Q8N4J0 409 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 NAXEQ8NCW5 288 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 LRRN4Q8WUT4 740 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 DNAJC7Q99615 494 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 HMX1Q9NP08 348 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 ARGLU1Q9NWB6 273 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 WDR35Q9P2L0 1181 aa6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 EPN1Q9Y6I3 576 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 V9GYY5 206 aaPredicted RBP6.82□□□□□ -1.32
SMARCE1-208ENST00000474246 PAPPA2Q9BXP8 1791 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ITIH6Q6UXX5 1313 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 SCN4AP35499 1836 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 USP17L3A6NCW0 530 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 USP17L4A6NCW7 530 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 INO80B-WBP1J3KQ70 363 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ZBTB7BO15156 539 aaPredicted RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 TBCAO75347 108 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 STAM2O75886 525 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 DDNO94850 711 aaPredicted RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ATP6V1B1P15313 513 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 DGKGP49619 791 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 PTPN5P54829 565 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 GSCP56915 257 aaPredicted RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 RWDD2BP57060 319 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 COPS2P61201 443 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 PDIA5Q14554 519 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 INTS11Q5TA45 600 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 CEP135Q66GS9 1140 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 TRIM68Q6AZZ1 485 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 USP17L2Q6R6M4 530 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 CRTC1Q6UUV9 634 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 USP17L1Q7RTZ2 530 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 TRIM42Q8IWZ5 723 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 SCUBE3Q8IX30 993 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ZNF606Q8WXB4 792 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 TIFAQ96CG3 184 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 PPM1MQ96MI6 270 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 PURBQ96QR8 312 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 RTFDC1Q9BY42 306 aaPredicted RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 PRKD2Q9BZL6 878 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ATP6V0A4Q9HBG4 840 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 PAPOLBQ9NRJ5 636 aaKnown RBP6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ANKEF1Q9NU02 776 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 TCP11L1Q9NUJ3 509 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 OBP2AQ9NY56 170 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 CALCOCO1Q9P1Z2 691 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 ZFATQ9P243 1243 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 INSRP06213 1382 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 QRICH2Q9H0J4 1663 aa6.81□□□□□ -1.32
SMARCE1-208ENST00000474246 GFPT2O94808 682 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 MBD4O95243 580 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 FMNL1O95466 1100 aaPredicted RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 IFIT1P09914 478 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 TMOD1P28289 359 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 SKIV2L2P42285 1042 aaKnown RBP6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 GUCY2FP51841 1108 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 NFKB2Q00653 900 aa6.8□□□□□ -1.32
SMARCE1-208ENST00000474246 DEUP1Q05D60 604 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms