RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 IGFBP6P24592 240 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 GABREP78334 506 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 CAP1Q01518 475 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 ZFPM1Q8IX07 1006 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 LZTR1Q8N653 840 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 NETO2Q8NC67 525 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 KREMEN2Q8NCW0 462 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 DDX1Q92499 740 aaKnown RBP4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 C1orf159Q96HA4 380 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 C8orf49Q96NF6 230 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 DHRS4Q9BTZ2 278 aa4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 TIMM13Q9Y5L4 95 aaPredicted RBP4.9□□□□□ -1.63
ECHDC1-213ENST00000474240 C7orf72A4D263 438 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 H7BY64 318 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 DLX3O60479 287 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 DIAPH1O60610 1272 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 CYBBP04839 570 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 ITGB3P05106 788 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 TACR2P21452 398 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 GDF5P43026 501 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 ZNF200P98182 395 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 CHRNA2Q15822 529 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 PLEKHN1Q494U1 663 aaPredicted RBP4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 MROH9Q5TGP6 573 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 CPZQ66K79 652 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 STYK1Q6J9G0 422 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 DCP2Q8IU60 420 aaKnown RBP4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 RIOX2Q8IUF8 465 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 Q8N1Y9 231 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 NLGN1Q8N2Q7 840 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 PTPRN2Q92932 1015 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 OSBP2Q969R2 916 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 SLITRK6Q9H5Y7 841 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 TNFRSF12AQ9NP84 129 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 GPRC5CQ9NQ84 441 aa4.89□□□□□ -1.63
ECHDC1-213ENST00000474240 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 PLA2G1BP04054 148 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 GRIA2P42262 883 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 CEBPAP49715 358 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 LSAMPQ13449 338 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 KIZQ2M2Z5 673 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 BICRALQ6AI39 1079 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 PAQR3Q6TCH7 311 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 RPTNQ6XPR3 784 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 USP53Q70EK8 1073 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 HOMER1Q86YM7 354 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 CPNE8Q86YQ8 564 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 IFNL3Q8IZI9 196 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 USP33Q8TEY7 942 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 ALG1Q9BT22 464 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 LGR4Q9BXB1 951 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 MRPL4Q9BYD3 311 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 COA3Q9Y2R0 106 aaPredicted RBP4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 TMA7Q9Y2S6 64 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 MRPS23Q9Y3D9 190 aaKnown RBP4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 NUB1Q9Y5A7 615 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 PTCH2Q9Y6C5 1203 aa4.88□□□□□ -1.63
ECHDC1-213ENST00000474240 MAFKO60675 156 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 ZBTB7AO95365 584 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 FAM153BP0C7A2 387 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 MSL3P1P0C860 447 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 PFKLP17858 780 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 SLC6A11P48066 632 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 GPR85P60893 370 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 MVKQ03426 396 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 CYP4F3Q08477 520 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 CBX2Q14781 532 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 SLC9A5Q14940 896 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 SF1Q15637 639 aaKnown RBP4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 Q8N1X5 172 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 SH3TC2Q8TF17 1288 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 FNIP1Q8TF40 1166 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 KISS1RQ969F8 398 aaPredicted RBP4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 PEX11GQ96HA9 241 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 TMEM169Q96HH4 297 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 LOXL4Q96JB6 756 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 PHF20Q9BVI0 1012 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 AP5M1Q9H0R1 490 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 TMX1Q9H3N1 280 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 TMEM260Q9NX78 707 aa4.87□□□□□ -1.63
ECHDC1-213ENST00000474240 MAPKAPK2P49137 400 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 PRSS53Q2L4Q9 553 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 TRIM61Q5EBN2 209 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 WWC2Q6AWC2 1192 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 CYP4F22Q6NT55 531 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 CCDC103Q8IW40 242 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 RCBTB1Q8NDN9 531 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 ZNF526Q8TF50 670 aaPredicted RBP4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 SEC14L1Q92503 715 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 APPBP2Q92624 585 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 TRMT2BQ96GJ1 504 aaKnown RBP4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 RBM15Q96T37 977 aaKnown RBP eCLIP4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 MTA3Q9BTC8 594 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 EPB41L1Q9H4G0 881 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 GULP1Q9UBP9 304 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 SFMBT1Q9UHJ3 866 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 X6R8D5 127 aa4.86□□□□□ -1.63
ECHDC1-213ENST00000474240 KRIT1O00522 736 aa4.85□□□□□ -1.63
ECHDC1-213ENST00000474240 PLD2O14939 933 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms