RNA–Protein interactions for RNA: ENST00000474088.1

PKD1-211, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 923 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-211ENST00000474088 FCHSD1Q86WN1 690 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 SPATA33Q96N06 139 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 CERS4Q9HA82 394 aa28.73■■■□□ 2.19
PKD1-211ENST00000474088 TRIP12Q14669 1992 aaPredicted RBP28.72■■■□□ 2.19
PKD1-211ENST00000474088 SORBS3O60504 671 aa28.72■■■□□ 2.19
PKD1-211ENST00000474088 GGPS1O95749 300 aa28.72■■■□□ 2.19
PKD1-211ENST00000474088 CCND2P30279 289 aa28.72■■■□□ 2.19
PKD1-211ENST00000474088 KCNJ6P48051 423 aa28.72■■■□□ 2.19
PKD1-211ENST00000474088 MRPS5P82675 430 aaKnown RBP28.72■■■□□ 2.19
PKD1-211ENST00000474088 TAP1Q03518 808 aa28.72■■■□□ 2.19
PKD1-211ENST00000474088 PTK7Q13308 1070 aa28.72■■■□□ 2.19
PKD1-211ENST00000474088 ZFP91Q96JP5 570 aaPredicted RBP28.72■■■□□ 2.19
PKD1-211ENST00000474088 MYO9BQ13459 2157 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 NBNO60934 754 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 CXCL10P02778 98 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 POU3F3P20264 500 aaPredicted RBP28.71■■■□□ 2.19
PKD1-211ENST00000474088 CATIPQ7Z7H3 387 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 MICALL1Q8N3F8 863 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 IGDCC4Q8TDY8 1250 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 MAP4K1Q92918 833 aa28.71■■■□□ 2.19
PKD1-211ENST00000474088 TSPYL2Q9H2G4 693 aaPredicted RBP28.71■■■□□ 2.19
PKD1-211ENST00000474088 ARHGEF15O94989 841 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 ANTXR2P58335 489 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 WDR5P61964 334 aaKnown RBP28.7■■■□□ 2.18
PKD1-211ENST00000474088 CNKSR3Q6P9H4 555 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 GPKOWQ92917 476 aaPredicted RBP eCLIP28.7■■■□□ 2.18
PKD1-211ENST00000474088 MLXIPQ9HAP2 919 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 VCANP13611 3396 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 MYH7BA7E2Y1 1941 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 TET1Q8NFU7 2136 aa28.7■■■□□ 2.18
PKD1-211ENST00000474088 TNFRSF10AO00220 468 aa28.69■■■□□ 2.18
PKD1-211ENST00000474088 UBA1P22314 1058 aaKnown RBP28.69■■■□□ 2.18
PKD1-211ENST00000474088 ZNF200P98182 395 aaPredicted RBP28.69■■■□□ 2.18
PKD1-211ENST00000474088 TRIM71Q2Q1W2 868 aaKnown RBP28.69■■■□□ 2.18
PKD1-211ENST00000474088 C16orf70Q9BSU1 422 aa28.69■■■□□ 2.18
PKD1-211ENST00000474088 MTCH2Q9Y6C9 303 aa28.69■■■□□ 2.18
PKD1-211ENST00000474088 EPOPA6NHQ4 379 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 GTPBP6O43824 516 aaPredicted RBP28.68■■■□□ 2.18
PKD1-211ENST00000474088 TLL1O43897 1013 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 HIC1Q14526 733 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 ZNF618Q5T7W0 954 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 TRAF7Q6Q0C0 670 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 MB21D2Q8IYB1 491 aaPredicted RBP28.68■■■□□ 2.18
PKD1-211ENST00000474088 ARNTL2Q8WYA1 636 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 WNT8BQ93098 351 aa28.68■■■□□ 2.18
PKD1-211ENST00000474088 IRX6P78412 446 aaPredicted RBP28.67■■■□□ 2.18
PKD1-211ENST00000474088 ABHD14A-ACY1A0A1B0GW23 586 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 DEFB103AP81534 67 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 MRPS9P82933 396 aaKnown RBP28.66■■■□□ 2.18
PKD1-211ENST00000474088 TCTN1Q2MV58 587 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 TMCO2Q7Z6W1 182 aaPredicted RBP28.66■■■□□ 2.18
PKD1-211ENST00000474088 PIBF1Q8WXW3 757 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 MAP3K14Q99558 947 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 ZBED2Q9BTP6 218 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 BCAS3Q9H6U6 928 aa28.66■■■□□ 2.18
PKD1-211ENST00000474088 RBM8AQ9Y5S9 174 aaKnown RBP28.66■■■□□ 2.18
PKD1-211ENST00000474088 STAM2O75886 525 aa28.65■■■□□ 2.18
PKD1-211ENST00000474088 GNPTABQ3T906 1256 aa28.65■■■□□ 2.18
PKD1-211ENST00000474088 ADAMTS19Q8TE59 1207 aa28.65■■■□□ 2.18
PKD1-211ENST00000474088 SPTBN5Q9NRC6 3674 aaKnown RBP28.65■■■□□ 2.18
PKD1-211ENST00000474088 FRMPD4Q14CM0 1322 aa28.65■■■□□ 2.18
PKD1-211ENST00000474088 H3BRB1 525 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 ICAM3P32942 547 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 IKBKEQ14164 716 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 ZNF654Q8IZM8 581 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 INPP4AQ96PE3 977 aaPredicted RBP28.64■■■□□ 2.18
PKD1-211ENST00000474088 SPZ1Q9BXG8 430 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 TUT1Q9H6E5 874 aaKnown RBP28.64■■■□□ 2.18
PKD1-211ENST00000474088 LY9Q9HBG7 655 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 RTEL1Q9NZ71 1219 aa28.64■■■□□ 2.18
PKD1-211ENST00000474088 BAZ2BQ9UIF8 2168 aaKnown RBP28.63■■■□□ 2.17
PKD1-211ENST00000474088 LCHNA4D1U4 455 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 SPATA31C2B4DYI2 1134 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 EFCAB14O75071 495 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 SMARCA1P28370 1054 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 MBTPS1Q14703 1052 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 SKIV2LQ15477 1246 aaKnown RBP28.63■■■□□ 2.17
PKD1-211ENST00000474088 KRT40Q6A162 431 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 SERINC5Q86VE9 423 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 IL27Q8NEV9 243 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 CTCFLQ8NI51 663 aaPredicted RBP28.63■■■□□ 2.17
PKD1-211ENST00000474088 MTA3Q9BTC8 594 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 MYL10Q9BUA6 226 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 CHD7Q9P2D1 2997 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 PTPRSQ13332 1948 aa28.63■■■□□ 2.17
PKD1-211ENST00000474088 DDAH1O94760 285 aa28.62■■■□□ 2.17
PKD1-211ENST00000474088 LGALS2P05162 132 aa28.62■■■□□ 2.17
PKD1-211ENST00000474088 KIF5BP33176 963 aa28.62■■■□□ 2.17
PKD1-211ENST00000474088 NEDD9Q14511 834 aa28.62■■■□□ 2.17
PKD1-211ENST00000474088 SPRED2Q7Z698 418 aa28.62■■■□□ 2.17
PKD1-211ENST00000474088 RRP36Q96EU6 259 aaKnown RBP28.62■■■□□ 2.17
PKD1-211ENST00000474088 C17orf102A2RUQ5 167 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 NOP56O00567 594 aaKnown RBP28.61■■■□□ 2.17
PKD1-211ENST00000474088 LGR5O75473 907 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 GJB5O95377 273 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 THPOP40225 353 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 GRB10Q13322 594 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 CASC1Q6TDU7 716 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 METTL7BQ6UX53 244 aa28.61■■■□□ 2.17
PKD1-211ENST00000474088 SMARCC2Q8TAQ2 1214 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms