RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 AK2P54819 239 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 NTRK3Q16288 839 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 C8orf34Q49A92 452 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 FAM47CQ5HY64 1035 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 SH3RF1Q7Z6J0 888 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
VAMP4-203ENST00000474047 MMP3P08254 477 aa16.27■□□□□ 0.19
VAMP4-203ENST00000474047 FAAP100Q0VG06 881 aa16.27■□□□□ 0.19
VAMP4-203ENST00000474047 NEDD9Q14511 834 aa16.27■□□□□ 0.19
VAMP4-203ENST00000474047 PKN1Q16512 942 aa16.27■□□□□ 0.19
VAMP4-203ENST00000474047 HABP4Q5JVS0 413 aaKnown RBP16.27■□□□□ 0.19
VAMP4-203ENST00000474047 CELF3Q5SZQ8 465 aaKnown RBP16.27■□□□□ 0.19
VAMP4-203ENST00000474047 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.19
VAMP4-203ENST00000474047 INPP4AQ96PE3 977 aaPredicted RBP16.27■□□□□ 0.19
VAMP4-203ENST00000474047 GDF15Q99988 308 aa16.27■□□□□ 0.19
VAMP4-203ENST00000474047 UPF2Q9HAU5 1272 aaKnown RBP16.27■□□□□ 0.19
VAMP4-203ENST00000474047 MYH7BA7E2Y1 1941 aa16.27■□□□□ 0.19
VAMP4-203ENST00000474047 SPATA31C2B4DYI2 1134 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 NOP56O00567 594 aaKnown RBP16.26■□□□□ 0.19
VAMP4-203ENST00000474047 UBA1P22314 1058 aaKnown RBP16.26■□□□□ 0.19
VAMP4-203ENST00000474047 ICAM3P32942 547 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 ZNF76P36508 570 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 AP3B2Q13367 1082 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 MYSM1Q5VVJ2 828 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 JAKMIP3Q5VZ66 844 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 MCTP2Q6DN12 878 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 BICD2Q8TD16 824 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 CDHR1Q96JP9 859 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 PGBD1Q96JS3 809 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 TMEM260Q9NX78 707 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 TPCN1Q9ULQ1 816 aa16.26■□□□□ 0.19
VAMP4-203ENST00000474047 TRIM43BA6NCK2 446 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 DEXIO95424 95 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 NLRP5P59047 1200 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 SP2Q02086 613 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 NBPF20Q3BBV1 942 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 REXO1Q8N1G1 1221 aaKnown RBP16.25■□□□□ 0.19
VAMP4-203ENST00000474047 GIMAP8Q8ND71 665 aaPredicted RBP16.25■□□□□ 0.19
VAMP4-203ENST00000474047 BADQ92934 168 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 TRIM43Q96BQ3 446 aaPredicted RBP16.25■□□□□ 0.19
VAMP4-203ENST00000474047 ANO3Q9BYT9 981 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 ZMYND12Q9H0C1 365 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 ESYT2A0FGR8 921 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 KIAA0355O15063 1070 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 PFKFB2O60825 505 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 BMP8BP34820 402 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 SCRN1Q12765 414 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 MTMR1Q13613 665 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 CYFIP1Q7L576 1253 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 FAM126BQ8IXS8 530 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 SLC43A3Q8NBI5 491 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 GPRASP2Q96D09 838 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 IL17RAQ96F46 866 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 SH3GLB2Q9NR46 395 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 VPS54Q9P1Q0 977 aa16.25■□□□□ 0.19
VAMP4-203ENST00000474047 GRIN2DO15399 1336 aa16.24■□□□□ 0.19
VAMP4-203ENST00000474047 PPFIA4O75335 1185 aa16.24■□□□□ 0.19
VAMP4-203ENST00000474047 SUPT20HL2P0C7V6 817 aa16.24■□□□□ 0.19
VAMP4-203ENST00000474047 KATNAL1Q9BW62 490 aa16.24■□□□□ 0.19
VAMP4-203ENST00000474047 C22orf23Q9BZE7 217 aa16.24■□□□□ 0.19
VAMP4-203ENST00000474047 NOD1Q9Y239 953 aa16.24■□□□□ 0.19
VAMP4-203ENST00000474047 A0A1W2PPC1 479 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 MAFGO15525 162 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 SP4Q02446 784 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 NFRKBQ6P4R8 1299 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 SENP7Q9BQF6 1050 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 ALG1Q9BT22 464 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 PPP1R12CQ9BZL4 782 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 TRPV6Q9H1D0 765 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 JADE2Q9NQC1 790 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 PKD2L1Q9P0L9 805 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 UBIAD1Q9Y5Z9 338 aa16.23■□□□□ 0.19
VAMP4-203ENST00000474047 B4GALT4O60513 344 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 TIMP1P01033 207 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 ZNF286BP0CG31 522 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 XBP1P17861 261 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 ITGB5P18084 799 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 CLK2P49760 499 aaKnown RBP16.22■□□□□ 0.19
VAMP4-203ENST00000474047 SEMA3FQ13275 785 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 METTL7BQ6UX53 244 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 C7orf31Q8N865 590 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 PPP1R13LQ8WUF5 828 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 MXRA8Q9BRK3 442 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 DNAH12Q6ZR08 3092 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 CD4P01730 458 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 SREBF1P36956 1147 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 PSEN2P49810 448 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 ARHGAP4P98171 946 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 FPGSQ05932 587 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 PTPN11Q06124 597 aaPredicted RBP16.22■□□□□ 0.19
VAMP4-203ENST00000474047 MFSD10Q14728 455 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 NECAB1Q8N987 351 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 PRO3102Q9H379 93 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 TBX21Q9UL17 535 aa16.22■□□□□ 0.19
VAMP4-203ENST00000474047 KIAA0753Q2KHM9 967 aa16.21■□□□□ 0.19
VAMP4-203ENST00000474047 CEP55Q53EZ4 464 aa16.21■□□□□ 0.19
VAMP4-203ENST00000474047 TDHQ8IZJ6 230 aa16.21■□□□□ 0.19
VAMP4-203ENST00000474047 TMEM199Q8N511 208 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms