RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 HIF3AQ9Y2N7 669 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 SLC12A7Q9Y666 1083 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 TAF6LQ9Y6J9 622 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 LRP5O75197 1615 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 COL16A1Q07092 1604 aaPredicted RBP6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 PHLPP1O60346 1717 aa6.78□□□□□ -1.32
ATPAF1-204ENST00000474020 UBN2Q6ZU65 1347 aa6.77□□□□□ -1.32
ATPAF1-204ENST00000474020 A0A1W2PQ27 194 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 A0A1W2PQ64 194 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 A0A1W2PQD8 194 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 IFIT3O14879 490 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 GPR182O15218 404 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 IGSF3O75054 1194 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 CAMTA2O94983 1202 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 MBD4O95243 580 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 PCP11498 1178 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 FGFR2P21802 821 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 IARSP41252 1262 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 GRIA4P48058 902 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 RCAN1P53805 252 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 GSTM4Q03013 218 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 PCDH1Q08174 1060 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 SSRP1Q08945 709 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 UBE4AQ14139 1066 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 PPP2R5BQ15173 497 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 CAMK4Q16566 473 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 SPRED3Q2MJR0 410 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 INTS5Q6P9B9 1019 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 CHST3Q7LGC8 479 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 CLEC10AQ8IUN9 316 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 FAM20CQ8IXL6 584 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 FSIP1Q8NA03 581 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 ALKBH8Q96BT7 664 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 DMRTB1Q96MA1 342 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 STRBPQ96SI9 672 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 NOL10Q9BSC4 688 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 UBAC1Q9BSL1 405 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 ALG1Q9BT22 464 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 RBCK1Q9BYM8 510 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 ANKRD2Q9GZV1 360 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 DNAJC25Q9H1X3 360 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 C7orf69Q9H7B7 122 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 SUGCTQ9HAC7 445 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 NCOA5Q9HCD5 579 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 CYP4F12Q9HCS2 524 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 NPHS2Q9NP85 383 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 RTEL1Q9NZ71 1219 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 DENND2AQ9ULE3 1009 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 GNEQ9Y223 722 aaKnown RBP6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 SLC4A4Q9Y6R1 1079 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 MYH3P11055 1940 aa6.77□□□□□ -1.33
ATPAF1-204ENST00000474020 PNPLA7Q6ZV29 1317 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CNTNAP4Q9C0A0 1308 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 SALL1Q9NSC2 1324 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CICQ96RK0 1608 aaPredicted RBP6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 NWD2Q9ULI1 1742 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 SOWAHDA6NJG2 315 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 SH2B2O14492 632 aaPredicted RBP6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 SPTLC2O15270 562 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 NEMFO60524 1076 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 NTSR2O95665 410 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 BMP3P12645 472 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 LIG1P18858 919 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CYP7A1P22680 504 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 LIFRP42702 1097 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 NT5C2P49902 561 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 ZNF165P49910 485 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CEBPZQ03701 1054 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CHRNDQ07001 517 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 NFIAQ12857 509 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 WTAPQ15007 396 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 ANO6Q4KMQ2 910 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 AKNAD1Q5T1N1 836 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 ADALQ6DHV7 355 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 FAM173BQ6P4H8 233 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 RBM43Q6ZSC3 357 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 TRIM42Q8IWZ5 723 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 AMOTL1Q8IY63 956 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CKAP2LQ8IYA6 745 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 SMG8Q8ND04 991 aaKnown RBP6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 FBXO18Q8NFZ0 1043 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 ESR2Q92731 530 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 FAM83CQ9BQN1 747 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 SDF4Q9BRK5 362 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 FUCA2Q9BTY2 467 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 TRIM5Q9C035 493 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 NRSN2Q9GZP1 204 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 BRMS1Q9HCU9 246 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 RAI14Q9P0K7 980 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 CEP131Q9UPN4 1083 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 STK36Q9NRP7 1315 aa6.76□□□□□ -1.33
ATPAF1-204ENST00000474020 HMX2A2RU54 273 aa6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 B4E1Z4 1266 aa6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 EIF1AYO14602 144 aaKnown RBP6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 GAS2O43903 313 aaKnown RBP6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 CTDNEP1O95476 244 aa6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 CHGBP05060 677 aa6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 CALM1P0DP23 149 aa6.75□□□□□ -1.33
ATPAF1-204ENST00000474020 CALM2P0DP24 149 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms