RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PRKAG2Q9UGJ0 569 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 PCDHA4Q9UN74 947 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 ATP11BQ9Y2G3 1177 aa15.7■□□□□ 0.1
USF1-205ENST00000473969 A0A0U1RQG5 324 aaPredicted RBP15.69■□□□□ 0.1
USF1-205ENST00000473969 SPATA31C2B4DYI2 1134 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 MAFGO15525 162 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 RGS20O76081 388 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 CTDNEP1O95476 244 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 GGPS1O95749 300 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 PTGS1P23219 599 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 ICAM3P32942 547 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 RTP1P59025 263 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 MTMR1Q13613 665 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 LRRC26Q2I0M4 334 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 CELF3Q5SZQ8 465 aaKnown RBP15.69■□□□□ 0.1
USF1-205ENST00000473969 CXCL17Q6UXB2 119 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 BLIDQ8IZY5 108 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 NSUN7Q8NE18 718 aaKnown RBP15.69■□□□□ 0.1
USF1-205ENST00000473969 SPATA33Q96N06 139 aa15.69■□□□□ 0.1
USF1-205ENST00000473969 LLPHQ9BRT6 129 aaKnown RBP15.69■□□□□ 0.1
USF1-205ENST00000473969 LRRC37A2A6NM11 1700 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 FRMPD3Q5JV73 1810 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 A6NJR5 290 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 NOP56O00567 594 aaKnown RBP15.68■□□□□ 0.1
USF1-205ENST00000473969 CTAGE5O15320 804 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 SORBS3O60504 671 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 UBA1P22314 1058 aaKnown RBP15.68■□□□□ 0.1
USF1-205ENST00000473969 SREBF1P36956 1147 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 ARHGAP4P98171 946 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 DGKDQ16760 1214 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 FAM184AQ8NB25 1140 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 AFG1LQ8WV93 481 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 EMID1Q96A84 441 aaPredicted RBP15.68■□□□□ 0.1
USF1-205ENST00000473969 AIFM3Q96NN9 605 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 MXRA8Q9BRK3 442 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 MTG1Q9BT17 334 aaPredicted RBP15.68■□□□□ 0.1
USF1-205ENST00000473969 SEZ6LQ9BYH1 1024 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 JADE2Q9NQC1 790 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 UBIAD1Q9Y5Z9 338 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 MROH7Q68CQ1 1323 aa15.68■□□□□ 0.1
USF1-205ENST00000473969 DCDC2CA8MYV0 355 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 CHMP4BP1P59074 171 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 HMGN5P82970 282 aaKnown RBP15.67■□□□□ 0.1
USF1-205ENST00000473969 ARHGAP1Q07960 439 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 TRIM60Q495X7 471 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 CEP55Q53EZ4 464 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 C1orf53Q5VUE5 145 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 MYSM1Q5VVJ2 828 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 DAGLBQ8NCG7 672 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 PPTC7Q8NI37 304 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 RASGRP4Q8TDF6 673 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 SENP7Q9BQF6 1050 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 KCNJ14Q9UNX9 436 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 PDE4DIPQ5VU43 2346 aa15.67■□□□□ 0.1
USF1-205ENST00000473969 CCDC194A0A1B0GVG4 234 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 ARVCFO00192 962 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 TLR3O15455 904 aaKnown RBP15.66■□□□□ 0.1
USF1-205ENST00000473969 JAK2O60674 1132 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 PQBP1O60828 265 aaKnown RBP15.66■□□□□ 0.1
USF1-205ENST00000473969 PPFIA4O75335 1185 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 MMP3P08254 477 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 CYP3A4P08684 503 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 ITGB5P18084 799 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 PURAQ00577 322 aaKnown RBP15.66■□□□□ 0.1
USF1-205ENST00000473969 SP2Q02086 613 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 ITGA7Q13683 1181 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 METTL7BQ6UX53 244 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 CYFIP1Q7L576 1253 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 KRT25Q7Z3Z0 450 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 SDF4Q9BRK5 362 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 KIF3AQ9Y496 699 aa15.66■□□□□ 0.1
USF1-205ENST00000473969 DTNBO60941 627 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
USF1-205ENST00000473969 SETQ01105 290 aaPredicted RBP15.65■□□□□ 0.1
USF1-205ENST00000473969 TLE2Q04725 743 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 SNX17Q15036 470 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 NONOQ15233 471 aaKnown RBP eCLIP15.65■□□□□ 0.1
USF1-205ENST00000473969 SAFBQ15424 915 aaKnown RBP eCLIP15.65■□□□□ 0.1
USF1-205ENST00000473969 PRPF38BQ5VTL8 546 aaKnown RBP15.65■□□□□ 0.1
USF1-205ENST00000473969 NIPA1Q7RTP0 329 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 PLA2G4DQ86XP0 818 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 KATNAL1Q9BW62 490 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 PRDM5Q9NQX1 630 aaPredicted RBP15.65■□□□□ 0.1
USF1-205ENST00000473969 KCNH7Q9NS40 1196 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 PKD2L1Q9P0L9 805 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 TCEAL9Q9UHQ7 104 aa15.65■□□□□ 0.1
USF1-205ENST00000473969 H0YGN5 161 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 KRT2P35908 639 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 USP11P51784 963 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 FOSBP53539 338 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 PSMC6P62333 389 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 SP4Q02446 784 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 SEMA3FQ13275 785 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 HSDL1Q3SXM5 330 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 FAM47CQ5HY64 1035 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 TBCKQ8TEA7 893 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 TMX3Q96JJ7 454 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 TOX2Q96NM4 488 aa15.64■□□□□ 0.09
USF1-205ENST00000473969 ZMYND8Q9ULU4 1186 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms