RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 PTGISQ16647 500 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 FAM47AQ5JRC9 791 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 C12orf60Q5U649 245 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 NFRKBQ6P4R8 1299 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 RIN2Q8WYP3 895 aaPredicted RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 STMN4Q9H169 189 aaPredicted RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 MLXIPQ9HAP2 919 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 EPB41L5Q9HCM4 733 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 FAM114A2Q9NRY5 505 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 DMGDHQ9UI17 866 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 INTUQ9ULD6 942 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 CAPN7Q9Y6W3 813 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 COL1A1P02452 1464 aaPredicted RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 SMCO2A6NFE2 343 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 TFRCP02786 760 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 CCDC172P0C7W6 258 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 HNRNPH1P31943 449 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 SMTNP53814 917 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 GUCY2DQ02846 1103 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 COL14A1Q05707 1796 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 KLHDC7AQ5VTJ3 777 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 RCSD1Q6JBY9 416 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 FAM205AQ6ZU69 1335 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 HOOK3Q86VS8 718 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 RAD54LQ92698 747 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 GPKOWQ92917 476 aaPredicted RBP eCLIP6.73□□□□□ -1.33
HERC4-209ENST00000473533 FAM84BQ96KN1 310 aaPredicted RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 MXD3Q9BW11 206 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 TLR10Q9BXR5 811 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 TMEM60Q9H2L4 133 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 MAD2L2Q9UI95 211 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 A0A0G2JS52 829 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 KIF1CO43896 1103 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 MARCH6O60337 910 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 FLOT1O75955 427 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 RASSF7Q02833 373 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 KLHL30Q0D2K2 578 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 ASTE1Q2TB18 679 aaPredicted RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 NBPF9Q3BBW0 867 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 MEI1Q5TIA1 1274 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 NLRP14Q86W24 1093 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 GSPT2Q8IYD1 628 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 KCTD17Q8N5Z5 321 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 ACTRT1Q8TDG2 376 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 ZNF473Q8WTR7 871 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 IFT81Q8WYA0 676 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 BAP1Q92560 729 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 ZFP91Q96JP5 570 aaPredicted RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 GDAP1L1Q96MZ0 367 aa6.73□□□□□ -1.33
HERC4-209ENST00000473533 RBM12Q9NTZ6 932 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.73□□□□□ -1.33
HERC4-209ENST00000473533 BAZ2AQ9UIF9 1905 aaKnown RBP6.73□□□□□ -1.33
HERC4-209ENST00000473533 A0A0A6YYK5 440 aaPredicted RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 RASSF10A6NK89 507 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 KLRF2D3W0D1 207 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 PGRMC1O00264 195 aaKnown RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 SLC8A1P32418 973 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 HLTFQ14527 1009 aaKnown RBP eCLIP6.72□□□□□ -1.332e-6■■■■□ 23.7
HERC4-209ENST00000473533 EDRF1Q3B7T1 1238 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 TTMPQ5BVD1 217 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 USP38Q8NB14 1042 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 MAGEC3Q8TD91 643 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 RAB17Q9H0T7 212 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 SEMA6BQ9H3T3 888 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 VCPKMTQ9H867 229 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 TMBIM4Q9HC24 238 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 AIPL1Q9NZN9 384 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 CYP2D7A0A087X1C5 515 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 GOLGA6L10A0A0M3HER8 536 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 ZNF263O14978 683 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 CETN3O15182 167 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 LDHBP07195 334 aaKnown RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 CRKLP46109 303 aaKnown RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 ADCY7P51828 1080 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 NPEPPSP55786 919 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 PPP4CP60510 307 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 PDCLQ13371 301 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 ASPRV1Q53RT3 343 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 SLC10A5Q5PT55 438 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 FAM26FQ5R3K3 315 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 RNF187Q5TA31 235 aaPredicted RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 NAA35Q5VZE5 725 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 ANKS4BQ8N8V4 417 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 KIAA0895Q8NCT3 520 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 METTL14Q9HCE5 456 aaKnown RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 SLC39A2Q9NP94 309 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 NFU1Q9UMS0 254 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 MINPP1Q9UNW1 487 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 DUSP10Q9Y6W6 482 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 GMNCA6NCL1 334 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 TRAF5O00463 557 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 PALMO75781 387 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 TECP42680 631 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 ACTN3Q08043 901 aaPredicted RBP6.72□□□□□ -1.33
HERC4-209ENST00000473533 NEDD9Q14511 834 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 ODF2Q5BJF6 829 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 CEP85LQ5SZL2 805 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 FAM83BQ5T0W9 1011 aa6.72□□□□□ -1.33
HERC4-209ENST00000473533 KRT26Q7Z3Y9 468 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms