RNA–Protein interactions for RNA: ENST00000473417.5

SNX4-204, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-204ENST00000473417 SUPT20HL2P0C7V6 817 aa20.8■□□□□ 0.92
SNX4-204ENST00000473417 PDIA3P30101 505 aaKnown RBP20.8■□□□□ 0.92
SNX4-204ENST00000473417 EVCP57679 992 aa20.8■□□□□ 0.92
SNX4-204ENST00000473417 NBPF20Q3BBV1 942 aa20.8■□□□□ 0.92
SNX4-204ENST00000473417 NFRKBQ6P4R8 1299 aa20.8■□□□□ 0.92
SNX4-204ENST00000473417 DNAJB2P25686 324 aa20.79■□□□□ 0.92
SNX4-204ENST00000473417 CCL23P55773 120 aa20.79■□□□□ 0.92
SNX4-204ENST00000473417 CCT2P78371 535 aaKnown RBP20.79■□□□□ 0.92
SNX4-204ENST00000473417 PTPN11Q06124 597 aaPredicted RBP20.79■□□□□ 0.92
SNX4-204ENST00000473417 AFG1LQ8WV93 481 aa20.79■□□□□ 0.92
SNX4-204ENST00000473417 EMID1Q96A84 441 aaPredicted RBP20.79■□□□□ 0.92
SNX4-204ENST00000473417 CDX2Q99626 313 aaPredicted RBP20.79■□□□□ 0.92
SNX4-204ENST00000473417 C22orf23Q9BZE7 217 aa20.79■□□□□ 0.92
SNX4-204ENST00000473417 DDX41Q9UJV9 622 aaKnown RBP20.79■□□□□ 0.92
SNX4-204ENST00000473417 PRUNE2Q8WUY3 3088 aa20.79■□□□□ 0.92
SNX4-204ENST00000473417 PTPRSQ13332 1948 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 CCDC196A0A1B0GTZ2 297 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 CYP2C9P11712 490 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 HOXA13P31271 388 aaPredicted RBP20.78■□□□□ 0.92
SNX4-204ENST00000473417 FUT2Q10981 343 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 PGM5Q15124 567 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 FAM47CQ5HY64 1035 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 HERVK_113Q902F9 699 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 MRVI1Q9Y6F6 885 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 V9GY48 417 aaPredicted RBP20.78■□□□□ 0.92
SNX4-204ENST00000473417 CNTNAP5Q8WYK1 1306 aa20.78■□□□□ 0.92
SNX4-204ENST00000473417 TET1Q8NFU7 2136 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 GCOM1H8Y6P7 765 aaPredicted RBP20.77■□□□□ 0.92
SNX4-204ENST00000473417 RGS20O76081 388 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 POLR2MP0CAP2 368 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 NEK4P51957 841 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 VSIG10LQ86VR7 867 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 IL31RAQ8NI17 732 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 PPP1R13LQ8WUF5 828 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 VWCEQ96DN2 955 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 NCOA5Q9HCD5 579 aaKnown RBP20.77■□□□□ 0.92
SNX4-204ENST00000473417 CHD7Q9P2D1 2997 aa20.77■□□□□ 0.92
SNX4-204ENST00000473417 FRMPD4Q14CM0 1322 aa20.77■□□□□ 0.91
SNX4-204ENST00000473417 FGBP02675 491 aa20.76■□□□□ 0.91
SNX4-204ENST00000473417 AK2P54819 239 aa20.76■□□□□ 0.91
SNX4-204ENST00000473417 STK3Q13188 491 aa20.76■□□□□ 0.91
SNX4-204ENST00000473417 ZNF274Q96GC6 653 aaPredicted RBP20.76■□□□□ 0.91
SNX4-204ENST00000473417 SCLYQ96I15 445 aa20.76■□□□□ 0.91
SNX4-204ENST00000473417 MTIF3Q9H2K0 278 aaKnown RBP20.76■□□□□ 0.91
SNX4-204ENST00000473417 UPF2Q9HAU5 1272 aaKnown RBP20.76■□□□□ 0.91
SNX4-204ENST00000473417 CXXC1Q9P0U4 656 aaPredicted RBP20.76■□□□□ 0.91
SNX4-204ENST00000473417 NID2Q14112 1375 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 GRXCR1A8MXD5 290 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 PPFIA3O75145 1194 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 MYCLP12524 364 aaPredicted RBP20.75■□□□□ 0.91
SNX4-204ENST00000473417 KCNV1Q6PIU1 500 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 HEATR3Q7Z4Q2 680 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 SESTD1Q86VW0 696 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 RPUSD2Q8IZ73 545 aaKnown RBP20.75■□□□□ 0.91
SNX4-204ENST00000473417 MYLIPQ8WY64 445 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 KAT2BQ92831 832 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.91
SNX4-204ENST00000473417 PBX4Q9BYU1 374 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 TPCN1Q9ULQ1 816 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 TRANK1O15050 2925 aa20.75■□□□□ 0.91
SNX4-204ENST00000473417 PITPNM1O00562 1244 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 PFKMP08237 780 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 CCND2P30279 289 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 PBX2P40425 430 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 RBM25P49756 843 aaKnown RBP20.74■□□□□ 0.91
SNX4-204ENST00000473417 LAMC2Q13753 1193 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 ANKRD1Q15327 319 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 DGKDQ16760 1214 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 OTOP2Q7RTS6 562 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 FCHSD1Q86WN1 690 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.74■□□□□ 0.91
SNX4-204ENST00000473417 PPTC7Q8NI37 304 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 TIFAQ96CG3 184 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 KIF2CQ99661 725 aa20.74■□□□□ 0.91
SNX4-204ENST00000473417 F2P00734 622 aa20.73■□□□□ 0.91
SNX4-204ENST00000473417 HOXD8P13378 290 aaPredicted RBP20.73■□□□□ 0.91
SNX4-204ENST00000473417 DHX37Q8IY37 1157 aaKnown RBP20.73■□□□□ 0.91
SNX4-204ENST00000473417 PHKBQ93100 1093 aa20.73■□□□□ 0.91
SNX4-204ENST00000473417 CTAGE1Q96RT6 745 aa20.73■□□□□ 0.91
SNX4-204ENST00000473417 MYO9BQ13459 2157 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 UBA1P22314 1058 aaKnown RBP20.72■□□□□ 0.91
SNX4-204ENST00000473417 RFC2P35250 354 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 CHMP4BP1P59074 171 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 NTRK3Q16288 839 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 MYSM1Q5VVJ2 828 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 WWC2Q6AWC2 1192 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 GDF6Q6KF10 455 aaPredicted RBP20.72■□□□□ 0.91
SNX4-204ENST00000473417 MAFAQ8NHW3 353 aaPredicted RBP20.72■□□□□ 0.91
SNX4-204ENST00000473417 SLKQ9H2G2 1235 aaPredicted RBP20.72■□□□□ 0.91
SNX4-204ENST00000473417 ZNF576Q9H609 170 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 NOD1Q9Y239 953 aa20.72■□□□□ 0.91
SNX4-204ENST00000473417 CPLX1O14810 134 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 GGPS1O95749 300 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 ZNF286BP0CG31 522 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 TGFB3P10600 412 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 FOSL2P15408 326 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 AKAP17AQ02040 695 aaKnown RBP20.71■□□□□ 0.91
SNX4-204ENST00000473417 SP2Q02086 613 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 GRIN2CQ14957 1233 aa20.71■□□□□ 0.91
SNX4-204ENST00000473417 RAB30Q15771 203 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms