RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DNA2P51530 1060 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 RASSF7Q02833 373 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 HAUS3Q68CZ6 603 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 PRR5LQ6MZQ0 368 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 RAD54LQ92698 747 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 TANGO6Q9C0B7 1094 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 POLLQ9UGP5 575 aa23.35■■□□□ 1.33
COL18A1-207ENST00000473212 IRAK1P51617 712 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 KCNMA1Q12791 1236 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 DPP8Q6V1X1 898 aaPredicted RBP23.34■■□□□ 1.33
COL18A1-207ENST00000473212 FAM196AQ6ZSG2 479 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 MXD3Q9BW11 206 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 EHD4Q9H223 541 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 STIM2Q9P246 746 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 BTAF1O14981 1849 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 NPHP3-ACAD11A0A0J9YXS1 232 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 SSBP05455 408 aaKnown RBP eCLIP23.34■■□□□ 1.33
COL18A1-207ENST00000473212 ADCY7P51828 1080 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 GUF1Q8N442 669 aaKnown RBP23.34■■□□□ 1.33
COL18A1-207ENST00000473212 TSEN2Q8NCE0 465 aaKnown RBP23.34■■□□□ 1.33
COL18A1-207ENST00000473212 MTMR8Q96EF0 704 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 MTMR4Q9NYA4 1195 aa23.34■■□□□ 1.33
COL18A1-207ENST00000473212 SLC1A4P43007 532 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 CACNA2D4Q7Z3S7 1137 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 TLR10Q9BXR5 811 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 ZNF287Q9HBT7 754 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 DDX4Q9NQI0 724 aaKnown RBP23.33■■□□□ 1.33
COL18A1-207ENST00000473212 PVALEFA0A1B0GWK0 134 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 FGFR1OPO95684 399 aaKnown RBP23.33■■□□□ 1.33
COL18A1-207ENST00000473212 PAFAH1B1P43034 410 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 FXR2P51116 673 aaKnown RBP eCLIP23.33■■□□□ 1.331e-6■■■■□ 25.7
COL18A1-207ENST00000473212 EPHB4P54760 987 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 ENOX2Q16206 610 aaKnown RBP23.33■■□□□ 1.33
COL18A1-207ENST00000473212 KCTD19Q17RG1 926 aaPredicted RBP23.33■■□□□ 1.33
COL18A1-207ENST00000473212 PDXDC1Q6P996 788 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 PACS2Q86VP3 889 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 RUBCNQ92622 972 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 HAS1Q92839 578 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 MS4A14Q96JA4 679 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 RABEP2Q9H5N1 569 aa23.33■■□□□ 1.33
COL18A1-207ENST00000473212 RBM12Q9NTZ6 932 aaKnown RBP23.33■■□□□ 1.33
COL18A1-207ENST00000473212 PJA2O43164 708 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 NAP1L1P55209 391 aaKnown RBP23.32■■□□□ 1.32
COL18A1-207ENST00000473212 PPFIA1Q13136 1202 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 ASTE1Q2TB18 679 aaPredicted RBP23.32■■□□□ 1.32
COL18A1-207ENST00000473212 NELFCDQ8IXH7 590 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 RPGRQ92834 1020 aaKnown RBP23.32■■□□□ 1.32
COL18A1-207ENST00000473212 STK17AQ9UEE5 414 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 DAGLAQ9Y4D2 1042 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 SHROOM1Q2M3G4 852 aaPredicted RBP23.32■■□□□ 1.32
COL18A1-207ENST00000473212 TRAPPC3LQ5T215 181 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 KLHDC7AQ5VTJ3 777 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 SH3GL2Q99962 352 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 CAPS2Q9BXY5 557 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 JMJD4Q9H9V9 463 aa23.32■■□□□ 1.32
COL18A1-207ENST00000473212 CCT5P48643 541 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 LRRC63Q05C16 580 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 TDRD12Q587J7 1177 aaKnown RBP23.31■■□□□ 1.32
COL18A1-207ENST00000473212 C8orf74Q6P047 294 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 KCTD1Q719H9 257 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 NGLY1Q96IV0 654 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 ZNF831Q5JPB2 1677 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 GOLGA8KD6RF30 607 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 RIMBP2O15034 1052 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 TLR2O60603 784 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 NOP2P46087 812 aaKnown RBP23.31■■□□□ 1.32
COL18A1-207ENST00000473212 GTF2IP78347 998 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 EHHADHQ08426 723 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 TTC31Q49AM3 519 aaPredicted RBP23.31■■□□□ 1.32
COL18A1-207ENST00000473212 HGSNATQ68CP4 663 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 TTC19Q6DKK2 380 aaPredicted RBP23.31■■□□□ 1.32
COL18A1-207ENST00000473212 ADGRF4Q8IZF3 695 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 DNAJC19Q96DA6 116 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 NOX5Q96PH1 765 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 GGA1Q9UJY5 639 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 ABCB11O95342 1321 aa23.31■■□□□ 1.32
COL18A1-207ENST00000473212 ESYT2A0FGR8 921 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 E9PMD0 336 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 COASYQ13057 564 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 TMEM266Q2M3C6 531 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 EMBQ6PCB8 327 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 ARL8AQ96BM9 186 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 MYH7BA7E2Y1 1941 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 IL1R1P14778 569 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 ARID5AQ03989 594 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 KRT79Q5XKE5 535 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 DNAAF5Q86Y56 855 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 PPM1EQ8WY54 764 aa23.3■■□□□ 1.32
COL18A1-207ENST00000473212 RGL2O15211 777 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 OPA1O60313 960 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 NOL4O94818 638 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 NOVP48745 357 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 GNGT1P63211 74 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 TMEM119Q4V9L6 283 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 USP17L10C9JJH3 530 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 TRAF5O00463 557 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 RAD21O60216 631 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 TTMPQ5BVD1 217 aa23.29■■□□□ 1.32
COL18A1-207ENST00000473212 RUFY1Q96T51 708 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms