RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 ZNF76P36508 570 aa23.69■■□□□ 1.38
TOP3A-204ENST00000472959 USP11P51784 963 aa23.69■■□□□ 1.38
TOP3A-204ENST00000472959 LAMC2Q13753 1193 aa23.69■■□□□ 1.38
TOP3A-204ENST00000472959 SAFBQ15424 915 aaKnown RBP eCLIP23.69■■□□□ 1.38
TOP3A-204ENST00000472959 FSCN1Q16658 493 aaKnown RBP23.69■■□□□ 1.38
TOP3A-204ENST00000472959 BRDTQ58F21 947 aaPredicted RBP23.69■■□□□ 1.38
TOP3A-204ENST00000472959 NIPA1Q7RTP0 329 aa23.69■■□□□ 1.38
TOP3A-204ENST00000472959 OR6J1Q8NGC5 347 aa23.69■■□□□ 1.38
TOP3A-204ENST00000472959 EMID1Q96A84 441 aaPredicted RBP23.69■■□□□ 1.38
TOP3A-204ENST00000472959 SMC3Q9UQE7 1217 aa23.69■■□□□ 1.38
TOP3A-204ENST00000472959 BRCA2P51587 3418 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 CCDC194A0A1B0GVG4 234 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 CTAGE5O15320 804 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 ZEB2O60315 1214 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 COL6A1P12109 1028 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 CPT1AP50416 773 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 MTMR1Q13613 665 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 NEDD9Q14511 834 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 NONOQ15233 471 aaKnown RBP eCLIP23.68■■□□□ 1.38
TOP3A-204ENST00000472959 CCSAPQ6IQ19 270 aaPredicted RBP23.68■■□□□ 1.38
TOP3A-204ENST00000472959 GIMAP8Q8ND71 665 aaPredicted RBP23.68■■□□□ 1.38
TOP3A-204ENST00000472959 FBXO18Q8NFZ0 1043 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 DIS3LQ8TF46 1054 aaKnown RBP23.68■■□□□ 1.38
TOP3A-204ENST00000472959 COPS5Q92905 334 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 SENP7Q9BQF6 1050 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 C11orf49Q9H6J7 331 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 PHF24Q9UPV7 400 aa23.68■■□□□ 1.38
TOP3A-204ENST00000472959 MYADML2A6NDP7 307 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 MOXD2PA6NHM9 499 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 MEIS1O00470 390 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 CIITAP33076 1130 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 FOSBP53539 338 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 ARHGAP1Q07960 439 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 SEMA3FQ13275 785 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 KCNA10Q16322 511 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
TOP3A-204ENST00000472959 DHX37Q8IY37 1157 aaKnown RBP23.67■■□□□ 1.38
TOP3A-204ENST00000472959 OXER1Q8TDS5 423 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 TBCKQ8TEA7 893 aa23.67■■□□□ 1.38
TOP3A-204ENST00000472959 A6NJR5 290 aa23.66■■□□□ 1.38
TOP3A-204ENST00000472959 UBA1P22314 1058 aaKnown RBP23.66■■□□□ 1.38
TOP3A-204ENST00000472959 PTGS1P23219 599 aa23.66■■□□□ 1.38
TOP3A-204ENST00000472959 GJB2P29033 226 aa23.66■■□□□ 1.38
TOP3A-204ENST00000472959 SP2Q02086 613 aa23.66■■□□□ 1.38
TOP3A-204ENST00000472959 HSCBQ8IWL3 235 aa23.66■■□□□ 1.38
TOP3A-204ENST00000472959 DIS3L2Q8IYB7 885 aaKnown RBP23.66■■□□□ 1.38
TOP3A-204ENST00000472959 INTS4Q96HW7 963 aaKnown RBP23.66■■□□□ 1.38
TOP3A-204ENST00000472959 KCNH7Q9NS40 1196 aa23.66■■□□□ 1.38
TOP3A-204ENST00000472959 FAM86B1E9PN63 330 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 KPNA6O60684 536 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 GGPS1O95749 300 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 FAM86B2P0C5J1 330 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 ACLYP53396 1101 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 BEX3Q00994 111 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 MYSM1Q5VVJ2 828 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 CYP2W1Q8TAV3 490 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 MLXIPQ9HAP2 919 aa23.65■■□□□ 1.38
TOP3A-204ENST00000472959 BTBD18B2RXH4 712 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 IRX5P78411 483 aaPredicted RBP23.64■■□□□ 1.37
TOP3A-204ENST00000472959 SETQ01105 290 aaPredicted RBP23.64■■□□□ 1.37
TOP3A-204ENST00000472959 GUCY1B3Q02153 619 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 NR5A1Q13285 461 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 METTL7BQ6UX53 244 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 PLA2G4DQ86XP0 818 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 PPTC7Q8NI37 304 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 AFG1LQ8WV93 481 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 TNFRSF25Q93038 417 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 SENP6Q9GZR1 1112 aaPredicted RBP23.64■■□□□ 1.37
TOP3A-204ENST00000472959 POLR3EQ9NVU0 708 aa23.64■■□□□ 1.37
TOP3A-204ENST00000472959 IGLV3-22A0A075B6J6 115 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 CYP3A7-CYP3A51PA0A087WV96 503 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 CABYRO75952 493 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 ASGR1P07306 291 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 KCNA2P16389 499 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 CYP3A7P24462 503 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 INF2Q27J81 1249 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 MOXD1Q6UVY6 613 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 PIK3AP1Q6ZUJ8 805 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 SPATA33Q96N06 139 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 HTATIP2Q9BUP3 242 aa23.63■■□□□ 1.37
TOP3A-204ENST00000472959 FOXP1Q9H334 677 aaPredicted RBP23.63■■□□□ 1.37
TOP3A-204ENST00000472959 FRMPD3Q5JV73 1810 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 A0A1W2PQ45 241 aaPredicted RBP23.62■■□□□ 1.37
TOP3A-204ENST00000472959 A0A1W2PQY0 241 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 EDIL3O43854 480 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 ARP10275 920 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 CYFIP1Q7L576 1253 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 NEK8Q86SG6 692 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 GLT1D1Q96MS3 346 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 NAP1L4Q99733 375 aaKnown RBP23.62■■□□□ 1.37
TOP3A-204ENST00000472959 AGO4Q9HCK5 861 aaKnown RBP23.62■■□□□ 1.37
TOP3A-204ENST00000472959 KIAA1217Q5T5P2 1943 aa23.62■■□□□ 1.37
TOP3A-204ENST00000472959 ELP1O95163 1332 aa23.61■■□□□ 1.37
TOP3A-204ENST00000472959 ATP9AO75110 1047 aa23.61■■□□□ 1.37
TOP3A-204ENST00000472959 MMP3P08254 477 aa23.61■■□□□ 1.37
TOP3A-204ENST00000472959 DGKDQ16760 1214 aa23.61■■□□□ 1.37
TOP3A-204ENST00000472959 PRR16Q569H4 304 aa23.61■■□□□ 1.37
TOP3A-204ENST00000472959 FERMT2Q96AC1 680 aa23.61■■□□□ 1.37
TOP3A-204ENST00000472959 NFASCO94856 1347 aa23.6■■□□□ 1.37
TOP3A-204ENST00000472959 PPFIA4O75335 1185 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms