RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MICALL1Q8N3F8 863 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 REPS2Q8NFH8 660 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 NCOA7Q8NI08 942 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 TMX3Q96JJ7 454 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 MTRQ99707 1265 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 LRRC2Q9BYS8 371 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 UPF3AQ9H1J1 476 aaKnown RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 DCP1AQ9NPI6 582 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ATP8A2Q9NTI2 1148 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ARPP21Q9UBL0 812 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 ADAMTS5Q9UNA0 930 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 MAFBQ9Y5Q3 323 aaPredicted RBP7.43□□□□□ -1.22
HDAC1-205ENST00000472928 UMODL1Q5DID0 1318 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 MROH7Q68CQ1 1323 aa7.43□□□□□ -1.22
HDAC1-205ENST00000472928 RIF1Q5UIP0 2472 aaKnown RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 TRIOO75962 3097 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 LRRC37A2A6NM11 1700 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 A0A0U1RQG5 324 aaPredicted RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 MINDY4BA8MYZ0 360 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 B4E1Z4 1266 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 RFXAPO00287 272 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 MPHOSPH10O00566 681 aaKnown RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 PRC1O43663 620 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 DUSP11O75319 330 aaKnown RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 LARGE1O95461 756 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 FGBP02675 491 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 ASGR1P07306 291 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 CYP2D6P10635 497 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 ANKRD1Q15327 319 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 RRP12Q5JTH9 1297 aaKnown RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 KRT40Q6A162 431 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 OTOP2Q7RTS6 562 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 AMOTL1Q8IY63 956 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 ARMC2Q8NEN0 867 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 STAG1Q8WVM7 1258 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 FGD4Q96M96 766 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 GLT1D1Q96MS3 346 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 RNF41Q9H4P4 317 aaPredicted RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 VCPKMTQ9H867 229 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 CNNM2Q9H8M5 875 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 CD320Q9NPF0 282 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 TOMM22Q9NS69 142 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 FBXO28Q9NVF7 368 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 MCM9Q9NXL9 1143 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 ZHX1Q9UKY1 873 aaPredicted RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 ZNF214Q9UL59 606 aaPredicted RBP7.42□□□□□ -1.22
HDAC1-205ENST00000472928 FAM184BQ9ULE4 1060 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 CNPY2Q9Y2B0 182 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 TMX2Q9Y320 296 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 GPSM3Q9Y4H4 160 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 MTCH2Q9Y6C9 303 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 MCM3APO60318 1980 aa7.42□□□□□ -1.22
HDAC1-205ENST00000472928 COL11A1P12107 1806 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 ZFHX2Q9C0A1 2572 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 DNAJC25-GNG10A0A024R161 153 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 USP17L21D6R901 530 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 PI4K2BG5E9Z4 385 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 SMIM22K7EJ46 135 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 VWA5AO00534 786 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 ATP9BO43861 1147 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 AKR1B1P15121 316 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 MCM5P33992 734 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 STAT3P40763 770 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 GJA9P57773 515 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 ANTXR2P58335 489 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 NKX3-2P78367 333 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 TOB2Q14106 344 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 KCTD2Q14681 263 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 PDXDC2PQ6P474 469 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 CTR9Q6PD62 1173 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 MAMDC4Q6UXC1 1216 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 MFSD6Q6ZSS7 791 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 Q6ZUG5 572 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 TMEM179Q6ZVK1 233 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 DHX32Q7L7V1 743 aaKnown RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 CHST3Q7LGC8 479 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 MSL3Q8N5Y2 521 aaKnown RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 KCTD17Q8N5Z5 321 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 SLC43A3Q8NBI5 491 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 PCSK9Q8NBP7 692 aaKnown RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 BRF1Q92994 677 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 OCSTAMPQ9BR26 566 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 NOC4LQ9BVI4 516 aaKnown RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 KRT23Q9C075 422 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 WNT8AQ9H1J5 351 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 SH2B1Q9NRF2 756 aaPredicted RBP7.41□□□□□ -1.22
HDAC1-205ENST00000472928 ANAPC4Q9UJX5 808 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 LIMCH1Q9UPQ0 1083 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 PCDHA11Q9Y5I1 949 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 WDR19Q8NEZ3 1342 aa7.41□□□□□ -1.22
HDAC1-205ENST00000472928 CFAP54Q96N23 3096 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 GOLGA8BA8MQT2 603 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 PIK3CDO00329 1044 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 WDR46O15213 610 aaKnown RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 ARHGEF15O94989 841 aa7.4□□□□□ -1.22
HDAC1-205ENST00000472928 POLR3DP05423 398 aaPredicted RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 SLC3A2P08195 630 aaKnown RBP7.4□□□□□ -1.22
HDAC1-205ENST00000472928 C6orf222P0C671 652 aaPredicted RBP7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms