RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 LAMC2Q13753 1193 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 HIC1Q14526 733 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 RPAINQ86UA6 219 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 POP1Q99575 1024 aaKnown RBP22.3■■□□□ 1.16
SORT1-203ENST00000471996 DCTPP1Q9H773 170 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 TOMM22Q9NS69 142 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 COL20A1Q9P218 1284 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 MUTYHQ9UIF7 546 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 ZNF318Q5VUA4 2279 aa22.3■■□□□ 1.16
SORT1-203ENST00000471996 THPOP40225 353 aa22.29■■□□□ 1.16
SORT1-203ENST00000471996 CTC1Q2NKJ3 1217 aa22.29■■□□□ 1.16
SORT1-203ENST00000471996 SERINC5Q86VE9 423 aa22.29■■□□□ 1.16
SORT1-203ENST00000471996 DHX37Q8IY37 1157 aaKnown RBP22.29■■□□□ 1.16
SORT1-203ENST00000471996 RMDN3Q96TC7 470 aa22.29■■□□□ 1.16
SORT1-203ENST00000471996 TTC41PQ6P2S7 1318 aa22.29■■□□□ 1.16
SORT1-203ENST00000471996 HOXD8P13378 290 aaPredicted RBP22.28■■□□□ 1.16
SORT1-203ENST00000471996 RRP12Q5JTH9 1297 aaKnown RBP22.28■■□□□ 1.16
SORT1-203ENST00000471996 VPS53Q5VIR6 699 aa22.28■■□□□ 1.16
SORT1-203ENST00000471996 RNF135Q8IUD6 432 aa22.28■■□□□ 1.16
SORT1-203ENST00000471996 PRSS33Q8NF86 280 aa22.28■■□□□ 1.16
SORT1-203ENST00000471996 PI4K2BQ8TCG2 481 aa22.28■■□□□ 1.16
SORT1-203ENST00000471996 PPFIA4O75335 1185 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 EIF3JO75822 258 aaKnown RBP22.27■■□□□ 1.16
SORT1-203ENST00000471996 UPP2O95045 317 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 PTPN5P54829 565 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 BMP8AQ7Z5Y6 402 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 SEPT8Q92599 483 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 EDAQ92838 391 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 TTC14Q96N46 770 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 MRVI1Q9Y6F6 885 aa22.27■■□□□ 1.16
SORT1-203ENST00000471996 COL4A6Q14031 1691 aa22.26■■□□□ 1.15
SORT1-203ENST00000471996 MBTPS2O43462 519 aa22.26■■□□□ 1.15
SORT1-203ENST00000471996 ST18O60284 1047 aa22.26■■□□□ 1.15
SORT1-203ENST00000471996 DLX2Q07687 328 aaPredicted RBP22.26■■□□□ 1.15
SORT1-203ENST00000471996 ALX1Q15699 326 aa22.26■■□□□ 1.15
SORT1-203ENST00000471996 GPATCH4Q5T3I0 446 aaKnown RBP22.26■■□□□ 1.15
SORT1-203ENST00000471996 ABCB11O95342 1321 aa22.26■■□□□ 1.15
SORT1-203ENST00000471996 LOC101059915A0A1B0GWI6 518 aaPredicted RBP22.25■■□□□ 1.15
SORT1-203ENST00000471996 HYAL1Q12794 435 aa22.25■■□□□ 1.15
SORT1-203ENST00000471996 CLUL1Q15846 466 aa22.25■■□□□ 1.15
SORT1-203ENST00000471996 ARHGEF16Q5VV41 709 aa22.25■■□□□ 1.15
SORT1-203ENST00000471996 MCF2L2Q86YR7 1114 aa22.25■■□□□ 1.15
SORT1-203ENST00000471996 UBA5Q9GZZ9 404 aa22.25■■□□□ 1.15
SORT1-203ENST00000471996 USP34Q70CQ2 3546 aa22.25■■□□□ 1.15
SORT1-203ENST00000471996 MICAL3Q7RTP6 2002 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 C5orf67F2Z3F1 127 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 RB1P06400 928 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 GOLGA8HP0CJ92 632 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 EIF2AK2P19525 551 aaKnown RBP22.24■■□□□ 1.15
SORT1-203ENST00000471996 SMAD4Q13485 552 aaKnown RBP22.24■■□□□ 1.15
SORT1-203ENST00000471996 CDC37Q16543 378 aaPredicted RBP22.24■■□□□ 1.15
SORT1-203ENST00000471996 IER5LQ5T953 404 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 MYSM1Q5VVJ2 828 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 PRRX2Q99811 253 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 IFIH1Q9BYX4 1025 aaKnown RBP22.24■■□□□ 1.15
SORT1-203ENST00000471996 LMAN2LQ9H0V9 348 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 CPVLQ9H3G5 476 aa22.24■■□□□ 1.15
SORT1-203ENST00000471996 NR3C2P08235 984 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 PKN1Q16512 942 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 HSDL1Q3SXM5 330 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 ATP6V0A1Q93050 837 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 IL17RAQ96F46 866 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 C16orf70Q9BSU1 422 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 OSBPL7Q9BZF2 842 aa22.23■■□□□ 1.15
SORT1-203ENST00000471996 C17orf102A2RUQ5 167 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 STXBP3O00186 592 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 FGAP02671 866 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 HOXC8P31273 242 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 CTNNB1P35222 781 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 TRIM67Q6ZTA4 783 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 FIBCD1Q8N539 461 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 PBXIP1Q96AQ6 731 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 SPATA33Q96N06 139 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 C11orf84Q9BUA3 381 aaPredicted RBP22.22■■□□□ 1.15
SORT1-203ENST00000471996 PXMP2Q9NR77 195 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 TRIOO75962 3097 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 C5orf42Q9H799 3197 aa22.22■■□□□ 1.15
SORT1-203ENST00000471996 TMEM221A6NGB7 291 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 M0R296 226 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 GRM6O15303 877 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 CAND2O75155 1236 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 TBX10O75333 385 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 BMPR1AP36894 532 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 CELF3Q5SZQ8 465 aaKnown RBP22.21■■□□□ 1.15
SORT1-203ENST00000471996 MRPL11Q9Y3B7 192 aaKnown RBP22.21■■□□□ 1.15
SORT1-203ENST00000471996 TECTAO75443 2155 aa22.21■■□□□ 1.15
SORT1-203ENST00000471996 TREHO43280 583 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 RGS20O76081 388 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 CTSHP09668 335 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 LINC00271P0C7V0 271 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 HSPD1P10809 573 aaKnown RBP22.2■■□□□ 1.14
SORT1-203ENST00000471996 TCF15Q12870 199 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 KCNV1Q6PIU1 500 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 ADGRF4Q8IZF3 695 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 OTUD7AQ8TE49 926 aaPredicted RBP22.2■■□□□ 1.14
SORT1-203ENST00000471996 APBB2Q92870 758 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 CD207Q9UJ71 328 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 RWDD3Q9Y3V2 267 aa22.2■■□□□ 1.14
SORT1-203ENST00000471996 SORBS3O60504 671 aa22.19■■□□□ 1.14
SORT1-203ENST00000471996 GGPS1O95749 300 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms