RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 GYS2P54840 703 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 CYP4F22Q6NT55 531 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 FGD2Q7Z6J4 655 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 MILR1Q7Z6M3 343 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 DDX53Q86TM3 631 aaKnown RBP6.73□□□□□ -1.33
CDHR3-208ENST00000471910 TRIM48Q8IWZ4 208 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 PHOSPHO1Q8TCT1 267 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 ALG3Q92685 438 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 KCNN1Q92952 543 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 FAM84AQ96KN4 292 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 SLC38A3Q99624 504 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 SMOC1Q9H4F8 434 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 SIT1Q9Y3P8 196 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 SHROOM4Q9ULL8 1493 aa6.73□□□□□ -1.33
CDHR3-208ENST00000471910 CADPSQ9ULU8 1353 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 TEX51A0A1B0GUA7 166 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 SGSM2O43147 1006 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 SEMA7AO75326 666 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 PYGMP11217 842 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 COL6A2P12110 1019 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 DALRD3Q5D0E6 543 aaKnown RBP6.72□□□□□ -1.33
CDHR3-208ENST00000471910 EMC4Q5J8M3 183 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 MFSD3Q96ES6 412 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 TMX1Q9H3N1 280 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 PALD1Q9ULE6 856 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 PCDHB4Q9Y5E5 795 aa6.72□□□□□ -1.33
CDHR3-208ENST00000471910 CCDC66A2RUB6 948 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 TADA3O75528 432 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 DNAJC8O75937 253 aaPredicted RBP6.71□□□□□ -1.34
CDHR3-208ENST00000471910 TMEM253P0C7T8 217 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 SDSP20132 328 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 CANXP27824 592 aaKnown RBP6.71□□□□□ -1.34
CDHR3-208ENST00000471910 TARBP2Q15633 366 aaKnown RBP6.71□□□□□ -1.34
CDHR3-208ENST00000471910 GPR19Q15760 415 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 EGFLAMQ63HQ2 1017 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 DHX37Q8IY37 1157 aaKnown RBP6.71□□□□□ -1.34
CDHR3-208ENST00000471910 NLGN4XQ8N0W4 816 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 AHI1Q8N157 1196 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 YIPF4Q9BSR8 244 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 CELF4Q9BZC1 486 aaKnown RBP6.71□□□□□ -1.34
CDHR3-208ENST00000471910 MCOLN1Q9GZU1 580 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 MYOTQ9UBF9 498 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 DSEQ9UL01 958 aa6.71□□□□□ -1.34
CDHR3-208ENST00000471910 TNPO3Q9Y5L0 923 aaKnown RBP6.71□□□□□ -1.34
CDHR3-208ENST00000471910 MYOCOSA0A1B0GUC4 107 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 NCAM1P13591 858 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 PFKLP17858 780 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 ZCCHC8Q6NZY4 707 aaKnown RBP6.7□□□□□ -1.34
CDHR3-208ENST00000471910 CNNM4Q6P4Q7 775 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 SYDE1Q6ZW31 735 aaPredicted RBP6.7□□□□□ -1.34
CDHR3-208ENST00000471910 UHMK1Q8TAS1 419 aaKnown RBP6.7□□□□□ -1.34
CDHR3-208ENST00000471910 DDX11Q96FC9 970 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 PPP1R16BQ96T49 567 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 SAMD15Q9P1V8 674 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 HCFC2Q9Y5Z7 792 aa6.7□□□□□ -1.34
CDHR3-208ENST00000471910 IRS4O14654 1257 aaPredicted RBP6.69□□□□□ -1.34
CDHR3-208ENST00000471910 CKMP06732 381 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 PDE6AP16499 860 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 KRT15P19012 456 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 NEK4P51957 841 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 ZNF200P98182 395 aaPredicted RBP6.69□□□□□ -1.34
CDHR3-208ENST00000471910 CFAP100Q494V2 611 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 ARHGAP36Q6ZRI8 547 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 LRRTM3Q86VH5 581 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 LDHDQ86WU2 507 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 IGSF22Q8N9C0 903 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 WNK4Q96J92 1243 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 RNF38Q9H0F5 515 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 KCNK12Q9HB15 430 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 CABP5Q9NP86 173 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 NGRNQ9NPE2 291 aaKnown RBP6.69□□□□□ -1.34
CDHR3-208ENST00000471910 COQ6Q9Y2Z9 468 aa6.69□□□□□ -1.34
CDHR3-208ENST00000471910 NFIBO00712 420 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 SLC27A2O14975 620 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 NKRFO15226 690 aaKnown RBP eCLIP6.68□□□□□ -1.34
CDHR3-208ENST00000471910 JMJD7P0C870 316 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 KCNA6P17658 529 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 TXKP42681 527 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 LACTBP83111 547 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-208ENST00000471910 TM4SF20Q53R12 229 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 HABP4Q5JVS0 413 aaKnown RBP6.68□□□□□ -1.34
CDHR3-208ENST00000471910 CDCA2Q69YH5 1023 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-208ENST00000471910 ETV3LQ6ZN32 361 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 OSTM1Q86WC4 334 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 AMIGO3Q86WK7 504 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 PPM1KQ8N3J5 372 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 C2orf69Q8N8R5 385 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 MZB1Q8WU39 189 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 DDX1Q92499 740 aaKnown RBP6.68□□□□□ -1.34
CDHR3-208ENST00000471910 CNTD2Q9H8S5 307 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 ASH2LQ9UBL3 628 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 MBD1Q9UIS9 605 aaPredicted RBP6.68□□□□□ -1.34
CDHR3-208ENST00000471910 CBLCQ9ULV8 474 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 FAN1Q9Y2M0 1017 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 PRKAB1Q9Y478 270 aa6.68□□□□□ -1.34
CDHR3-208ENST00000471910 TCRBV5S2A0A599 114 aa6.67□□□□□ -1.34
CDHR3-208ENST00000471910 N4BP3O15049 544 aa6.67□□□□□ -1.34
CDHR3-208ENST00000471910 MYCLP1P12525 358 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms