RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 M0R2N6 131 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 ARIH2O95376 493 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 COL6A1P12109 1028 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 ZNF76P36508 570 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 LAMC2Q13753 1193 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 NEDD9Q14511 834 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 NPY5RQ15761 445 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 FSCN1Q16658 493 aaKnown RBP17.23■□□□□ 0.35
SNX13-205ENST00000471744 NIPA1Q7RTP0 329 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 RASGRP4Q8TDF6 673 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 SNX21Q969T3 373 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 EMID1Q96A84 441 aaPredicted RBP17.23■□□□□ 0.35
SNX13-205ENST00000471744 C8orf76Q96K31 380 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 SENP7Q9BQF6 1050 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 MXRA8Q9BRK3 442 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 JADE2Q9NQC1 790 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 RTEL1Q9NZ71 1219 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 PHF24Q9UPV7 400 aa17.23■□□□□ 0.35
SNX13-205ENST00000471744 CCDC194A0A1B0GVG4 234 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 KPNA6O60684 536 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 CABYRO75952 493 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 MMP1P03956 469 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 KRT2P35908 639 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 USP11P51784 963 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 MTMR1Q13613 665 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 NONOQ15233 471 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX13-205ENST00000471744 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX13-205ENST00000471744 KCNA10Q16322 511 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 LY6KQ17RY6 165 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 CEP55Q53EZ4 464 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 DHX37Q8IY37 1157 aaKnown RBP17.22■□□□□ 0.35
SNX13-205ENST00000471744 DIS3LQ8TF46 1054 aaKnown RBP17.22■□□□□ 0.35
SNX13-205ENST00000471744 CRYGNQ8WXF5 182 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 POLR3EQ9NVU0 708 aa17.22■□□□□ 0.35
SNX13-205ENST00000471744 DOCK5Q9H7D0 1870 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 CTAGE5O15320 804 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 ITGB5P18084 799 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 UBA1P22314 1058 aaKnown RBP17.21■□□□□ 0.35
SNX13-205ENST00000471744 CIITAP33076 1130 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 ACLYP53396 1101 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 SETQ01105 290 aaPredicted RBP17.21■□□□□ 0.35
SNX13-205ENST00000471744 MLLT1Q03111 559 aaPredicted RBP17.21■□□□□ 0.35
SNX13-205ENST00000471744 ARHGAP1Q07960 439 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 KRT40Q6A162 431 aa17.21■□□□□ 0.35
SNX13-205ENST00000471744 CCSAPQ6IQ19 270 aaPredicted RBP17.21■□□□□ 0.35
SNX13-205ENST00000471744 ZFP91Q96JP5 570 aaPredicted RBP17.21■□□□□ 0.35
SNX13-205ENST00000471744 BRCA2P51587 3418 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 MYADML2A6NDP7 307 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 A6NJR5 290 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 K7ELQ4 463 aaPredicted RBP17.2■□□□□ 0.34
SNX13-205ENST00000471744 MEIS1O00470 390 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 ADAMTS3O15072 1205 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 DTNBO60941 627 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 GGPS1O95749 300 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 ASGR1P07306 291 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 SEMA3FQ13275 785 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 CUL4AQ13619 759 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 CELF3Q5SZQ8 465 aaKnown RBP17.2■□□□□ 0.34
SNX13-205ENST00000471744 TMEM63BQ5T3F8 832 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 PPTC7Q8NI37 304 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 TBCKQ8TEA7 893 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 COPS5Q92905 334 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 SEZ6LQ9BYH1 1024 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 SENP6Q9GZR1 1112 aaPredicted RBP17.2■□□□□ 0.34
SNX13-205ENST00000471744 MLXIPQ9HAP2 919 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 GJB4Q9NTQ9 266 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 SMC3Q9UQE7 1217 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 ELP1O95163 1332 aa17.2■□□□□ 0.34
SNX13-205ENST00000471744 SCN10AQ9Y5Y9 1956 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 BEX3Q00994 111 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 MYSM1Q5VVJ2 828 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 MOXD1Q6UVY6 613 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 METTL7BQ6UX53 244 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 PLA2G4DQ86XP0 818 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 HSCBQ8IWL3 235 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 DIS3L2Q8IYB7 885 aaKnown RBP17.19■□□□□ 0.34
SNX13-205ENST00000471744 FBXO18Q8NFZ0 1043 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 NAP1L4Q99733 375 aaKnown RBP17.19■□□□□ 0.34
SNX13-205ENST00000471744 KCNH7Q9NS40 1196 aa17.19■□□□□ 0.34
SNX13-205ENST00000471744 ALPK3Q96L96 1907 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 A0A1W2PQ45 241 aaPredicted RBP17.18■□□□□ 0.34
SNX13-205ENST00000471744 A0A1W2PQY0 241 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 SP2Q02086 613 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 DGKDQ16760 1214 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 C1orf53Q5VUE5 145 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 AFG1LQ8WV93 481 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
SNX13-205ENST00000471744 SPATA33Q96N06 139 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 STARD7Q9NQZ5 370 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 NFASCO94856 1347 aa17.18■□□□□ 0.34
SNX13-205ENST00000471744 FAM86B1E9PN63 330 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 NOP56O00567 594 aaKnown RBP17.17■□□□□ 0.34
SNX13-205ENST00000471744 PPFIA4O75335 1185 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 MMP3P08254 477 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 FAM86B2P0C5J1 330 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 HOXD8P13378 290 aaPredicted RBP17.17■□□□□ 0.34
SNX13-205ENST00000471744 GCFC2P16383 781 aaKnown RBP17.17■□□□□ 0.34
SNX13-205ENST00000471744 KCNA2P16389 499 aa17.17■□□□□ 0.34
SNX13-205ENST00000471744 PTGS1P23219 599 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms