RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 USP38Q8NB14 1042 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 KCNB2Q92953 911 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 RRP36Q96EU6 259 aaKnown RBP21.75■■□□□ 1.07
COMMD1-207ENST00000471704 NKX2-4Q9H2Z4 354 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 PRDM12Q9H4Q4 367 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 BRPF3Q9ULD4 1205 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 SLC12A7Q9Y666 1083 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 MRVI1Q9Y6F6 885 aa21.75■■□□□ 1.07
COMMD1-207ENST00000471704 SPTBN5Q9NRC6 3674 aaKnown RBP21.74■■□□□ 1.07
COMMD1-207ENST00000471704 hCG_1642624A0A1W2PR95 340 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 CALM1P0DP23 149 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 CALM2P0DP24 149 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 CALM3P0DP25 149 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 RABGGTBP53611 331 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 PTGISQ16647 500 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 GDF6Q6KF10 455 aaPredicted RBP21.74■■□□□ 1.07
COMMD1-207ENST00000471704 APOA5Q6Q788 366 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 TMTC3Q6ZXV5 915 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 FANCBQ8NB91 859 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 RETREG2Q8NC44 543 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 PPTC7Q8NI37 304 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 GPKOWQ92917 476 aaPredicted RBP eCLIP21.74■■□□□ 1.07
COMMD1-207ENST00000471704 LZTS2Q9BRK4 669 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 PCDHA11Q9Y5I1 949 aa21.74■■□□□ 1.07
COMMD1-207ENST00000471704 HAS3O00219 553 aa21.73■■□□□ 1.07
COMMD1-207ENST00000471704 CPA1P15085 419 aa21.73■■□□□ 1.07
COMMD1-207ENST00000471704 ATP2A2P16615 1042 aaKnown RBP21.73■■□□□ 1.07
COMMD1-207ENST00000471704 ADGRE1Q14246 886 aa21.73■■□□□ 1.07
COMMD1-207ENST00000471704 MYSM1Q5VVJ2 828 aa21.73■■□□□ 1.07
COMMD1-207ENST00000471704 KCNV1Q6PIU1 500 aa21.73■■□□□ 1.07
COMMD1-207ENST00000471704 DHX32Q7L7V1 743 aaKnown RBP21.73■■□□□ 1.07
COMMD1-207ENST00000471704 SLC28A3Q9HAS3 691 aa21.73■■□□□ 1.07
COMMD1-207ENST00000471704 REV3LO60673 3130 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 ZBBXA8MT70 800 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 MEIS2O14770 477 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 F2P00734 622 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 TGFB3P10600 412 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 MYOGP15173 224 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 GNAQP50148 359 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 CHMP4BP1P59074 171 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 MRPS9P82933 396 aaKnown RBP21.72■■□□□ 1.07
COMMD1-207ENST00000471704 SP2Q02086 613 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 RBL2Q08999 1139 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 GPNMBQ14956 572 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 CELF3Q5SZQ8 465 aaKnown RBP21.72■■□□□ 1.07
COMMD1-207ENST00000471704 DHX37Q8IY37 1157 aaKnown RBP21.72■■□□□ 1.07
COMMD1-207ENST00000471704 CCDC82Q8N4S0 544 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 CAGE1Q8TC20 777 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 GAS2L1Q99501 681 aaPredicted RBP21.72■■□□□ 1.07
COMMD1-207ENST00000471704 GTF2IRD1Q9UHL9 959 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 NOD1Q9Y239 953 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 CNTNAP5Q8WYK1 1306 aa21.72■■□□□ 1.07
COMMD1-207ENST00000471704 PPFIA4O75335 1185 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 ACTN1P12814 892 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 HSPA4P34932 840 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 PSEN2P49810 448 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 USP17L6PQ6QN14 398 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 AFAP1L1Q8TED9 768 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 DHX38Q92620 1227 aaKnown RBP21.71■■□□□ 1.07
COMMD1-207ENST00000471704 HDAC6Q9UBN7 1215 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 SEC63Q9UGP8 760 aaKnown RBP21.71■■□□□ 1.07
COMMD1-207ENST00000471704 SNX14Q9Y5W7 946 aa21.71■■□□□ 1.07
COMMD1-207ENST00000471704 PIK3CDO00329 1044 aa21.7■■□□□ 1.06
COMMD1-207ENST00000471704 CCND2P30279 289 aa21.7■■□□□ 1.06
COMMD1-207ENST00000471704 FUT2Q10981 343 aa21.7■■□□□ 1.06
COMMD1-207ENST00000471704 PHOSPHO2Q8TCD6 241 aa21.7■■□□□ 1.06
COMMD1-207ENST00000471704 KATNAL1Q9BW62 490 aa21.7■■□□□ 1.06
COMMD1-207ENST00000471704 BCAS3Q9H6U6 928 aa21.7■■□□□ 1.06
COMMD1-207ENST00000471704 SORBS3O60504 671 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 ZNF286BP0CG31 522 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 UBA1P22314 1058 aaKnown RBP21.69■■□□□ 1.06
COMMD1-207ENST00000471704 SEMA3FQ13275 785 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 KRT32Q14532 448 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 MFSD10Q14728 455 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 KIAA0753Q2KHM9 967 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 HSDL1Q3SXM5 330 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 CCDC155Q8N6L0 562 aa21.69■■□□□ 1.06
COMMD1-207ENST00000471704 FAM217BQ9NTX9 383 aaPredicted RBP21.69■■□□□ 1.06
COMMD1-207ENST00000471704 PTPRSQ13332 1948 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 GGPS1O95749 300 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 NEFLP07196 543 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 SELPP16109 830 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 C7orf31Q8N865 590 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 SPATA33Q96N06 139 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 INPP4AQ96PE3 977 aaPredicted RBP21.68■■□□□ 1.06
COMMD1-207ENST00000471704 SLC9A7Q96T83 725 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 ALG1Q9BT22 464 aa21.68■■□□□ 1.06
COMMD1-207ENST00000471704 FTOQ9C0B1 505 aaKnown RBP eCLIP21.68■■□□□ 1.06
COMMD1-207ENST00000471704 KLF18A0A0U1RQI7 1052 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 ZBTB43O43298 467 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 BAIAP3O94812 1187 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 CKBP12277 381 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 CDC27P30260 824 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 UBE2SQ16763 222 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 TRIM71Q2Q1W2 868 aaKnown RBP21.67■■□□□ 1.06
COMMD1-207ENST00000471704 PPP2R2DQ66LE6 453 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 TYW1BQ6NUM6 668 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 LRRC8DQ7L1W4 858 aa21.67■■□□□ 1.06
COMMD1-207ENST00000471704 SMARCC2Q8TAQ2 1214 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms