RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CDHR1Q96JP9 859 aa17.47■□□□□ 0.39
SDC3-203ENST00000471567 GLT1D1Q96MS3 346 aa17.47■□□□□ 0.39
SDC3-203ENST00000471567 AIFM3Q96NN9 605 aa17.47■□□□□ 0.39
SDC3-203ENST00000471567 POLR3EQ9NVU0 708 aa17.47■□□□□ 0.39
SDC3-203ENST00000471567 PCDHA4Q9UN74 947 aa17.47■□□□□ 0.39
SDC3-203ENST00000471567 PDE4DIPQ5VU43 2346 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 EVI5O60447 810 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 SNX17Q15036 470 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 LRRC26Q2I0M4 334 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 DHX37Q8IY37 1157 aaKnown RBP17.46■□□□□ 0.39
SDC3-203ENST00000471567 BLIDQ8IZY5 108 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 PGBD1Q96JS3 809 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 SENP7Q9BQF6 1050 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 ALG1Q9BT22 464 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 JADE2Q9NQC1 790 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 STARD7Q9NQZ5 370 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 NR2E3Q9Y5X4 410 aa17.46■□□□□ 0.39
SDC3-203ENST00000471567 ADAMTS3O15072 1205 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 CYP3A4P08684 503 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 ITGB5P18084 799 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 UBA1P22314 1058 aaKnown RBP17.45■□□□□ 0.38
SDC3-203ENST00000471567 ATN1P54259 1190 aaPredicted RBP17.45■□□□□ 0.38
SDC3-203ENST00000471567 ARHGAP4P98171 946 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 SP2Q02086 613 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 SEMA3FQ13275 785 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 NEDD9Q14511 834 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 CELF3Q5SZQ8 465 aaKnown RBP17.45■□□□□ 0.38
SDC3-203ENST00000471567 MYSM1Q5VVJ2 828 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 GIMAP8Q8ND71 665 aaPredicted RBP17.45■□□□□ 0.38
SDC3-203ENST00000471567 CRYGNQ8WXF5 182 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 MXRA8Q9BRK3 442 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 PHF20Q9BVI0 1012 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 SEZ6LQ9BYH1 1024 aa17.45■□□□□ 0.38
SDC3-203ENST00000471567 M0R2N6 131 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 JAK2O60674 1132 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 GGPS1O95749 300 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 NPY5RQ15761 445 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 CEP55Q53EZ4 464 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 CXCL17Q6UXB2 119 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 NIPA1Q7RTP0 329 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 PPTC7Q8NI37 304 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 RASGRP4Q8TDF6 673 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 AFG1LQ8WV93 481 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
SDC3-203ENST00000471567 MKI67P46013 3256 aaKnown RBP17.43■□□□□ 0.38
SDC3-203ENST00000471567 A0A0U1RQG5 324 aaPredicted RBP17.43■□□□□ 0.38
SDC3-203ENST00000471567 MEIS1O00470 390 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 MMP3P08254 477 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 ZNF76P36508 570 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 RTP1P59025 263 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 HMGN5P82970 282 aaKnown RBP17.43■□□□□ 0.38
SDC3-203ENST00000471567 PURAQ00577 322 aaKnown RBP17.43■□□□□ 0.38
SDC3-203ENST00000471567 MTMR1Q13613 665 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 METTL7BQ6UX53 244 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 VTI1AQ96AJ9 217 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 MTG1Q9BT17 334 aaPredicted RBP17.43■□□□□ 0.38
SDC3-203ENST00000471567 KCNJ14Q9UNX9 436 aa17.43■□□□□ 0.38
SDC3-203ENST00000471567 DTNBO60941 627 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 PPFIA4O75335 1185 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 MYL3P08590 195 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 HOXD8P13378 290 aaPredicted RBP17.42■□□□□ 0.38
SDC3-203ENST00000471567 CIITAP33076 1130 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 USP11P51784 963 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 DGKDQ16760 1214 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 TMX3Q96JJ7 454 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 SPATA33Q96N06 139 aa17.42■□□□□ 0.38
SDC3-203ENST00000471567 ARVCFO00192 962 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 CD2BP2O95400 341 aaKnown RBP17.41■□□□□ 0.38
SDC3-203ENST00000471567 KCNA2P16389 499 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 CDK7P50613 346 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 ITGA7Q13683 1181 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 TRIM29Q14134 588 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 TRIM60Q495X7 471 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 ANKRD33Q7Z3H0 272 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 C7orf61Q8IZ16 206 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 SLC43A3Q8NBI5 491 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 CYP2W1Q8TAV3 490 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 TOX2Q96NM4 488 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 BRMS1Q9HCU9 246 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 KCNH7Q9NS40 1196 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 ATP11BQ9Y2G3 1177 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 TNRC18O15417 2968 aaPredicted RBP17.41■□□□□ 0.38
SDC3-203ENST00000471567 MROH7Q68CQ1 1323 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 ALPK3Q96L96 1907 aa17.41■□□□□ 0.38
SDC3-203ENST00000471567 ATP9AO75110 1047 aa17.4■□□□□ 0.38
SDC3-203ENST00000471567 HSDL1Q3SXM5 330 aa17.4■□□□□ 0.38
SDC3-203ENST00000471567 CYFIP1Q7L576 1253 aa17.4■□□□□ 0.38
SDC3-203ENST00000471567 GJB4Q9NTQ9 266 aa17.4■□□□□ 0.38
SDC3-203ENST00000471567 MYH7BA7E2Y1 1941 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 IGLV3-22A0A075B6J6 115 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 CCDC194A0A1B0GVG4 234 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 DCDC2CA8MYV0 355 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 FAM86B1E9PN63 330 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 NOP56O00567 594 aaKnown RBP17.39■□□□□ 0.37
SDC3-203ENST00000471567 MMP1P03956 469 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 FAM86B2P0C5J1 330 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 ARP10275 920 aa17.39■□□□□ 0.37
SDC3-203ENST00000471567 KRT2P35908 639 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms