RNA–Protein interactions for RNA: ENST00000471259.1

MRPL40-203, Transcript of mitochondrial ribosomal protein L40, humanhuman

TSL 2

Gene MRPL40, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-203ENST00000471259 INCENPQ9NQS7 918 aa13.21□□□□□ -0.29
MRPL40-203ENST00000471259 DDX41Q9UJV9 622 aaKnown RBP13.21□□□□□ -0.29
MRPL40-203ENST00000471259 RWDD3Q9Y3V2 267 aa13.21□□□□□ -0.29
MRPL40-203ENST00000471259 DHX16O60231 1041 aaKnown RBP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 TGFB3P10600 412 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 HTRA4P83105 476 aaPredicted RBP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 CDC37Q16543 378 aaPredicted RBP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 ZNF618Q5T7W0 954 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 FAM117BQ6P1L5 589 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 EP400NLQ6ZTU2 488 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 SYTL5Q8TDW5 730 aaPredicted RBP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 PPP1R13LQ8WUF5 828 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 APBB2Q92870 758 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 KHSRPQ92945 711 aaKnown RBP eCLIP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 NSUN3Q9H649 340 aaKnown RBP13.2□□□□□ -0.3
MRPL40-203ENST00000471259 KAT14Q9H8E8 782 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 PIEZO1Q92508 2521 aa13.2□□□□□ -0.3
MRPL40-203ENST00000471259 MUC6Q6W4X9 2439 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 H3BNC9 293 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 HAS3O00219 553 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 NR3C2P08235 984 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 IL9P15248 144 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 THPOP40225 353 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 MRE11P49959 708 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 GPM6BQ13491 265 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 GPNMBQ14956 572 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 EPC2Q52LR7 807 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 TMCO2Q7Z6W1 182 aaPredicted RBP13.19□□□□□ -0.3
MRPL40-203ENST00000471259 FBXO11Q86XK2 927 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 DBF4BQ8NFT6 615 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
MRPL40-203ENST00000471259 PPP2R3CQ969Q6 453 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 TAAR1Q96RJ0 339 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 PRRX2Q99811 253 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 LMAN2LQ9H0V9 348 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 CD320Q9NPF0 282 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 BRWD1Q9NSI6 2320 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 KIAA1217Q5T5P2 1943 aa13.19□□□□□ -0.3
MRPL40-203ENST00000471259 REV3LO60673 3130 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 PTPRSQ13332 1948 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 C17orf102A2RUQ5 167 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 RB1P06400 928 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 PKN1Q16512 942 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 PLEKHG4Q58EX7 1191 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 VPS53Q5VIR6 699 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 SERINC5Q86VE9 423 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 ADHFE1Q8IWW8 467 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
MRPL40-203ENST00000471259 ATP6V0A1Q93050 837 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 TOP1MTQ969P6 601 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 SPATA33Q96N06 139 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 C17orf80Q9BSJ5 609 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 UBA5Q9GZZ9 404 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 MLXIPQ9HAP2 919 aa13.18□□□□□ -0.3
MRPL40-203ENST00000471259 ZNF213O14771 459 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 FOXP2O15409 715 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 CFBP00751 764 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 PARP1P09874 1014 aaKnown RBP13.17□□□□□ -0.3
MRPL40-203ENST00000471259 HOXD8P13378 290 aaPredicted RBP13.17□□□□□ -0.3
MRPL40-203ENST00000471259 EIF2AK2P19525 551 aaKnown RBP13.17□□□□□ -0.3
MRPL40-203ENST00000471259 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
MRPL40-203ENST00000471259 SPRED2Q7Z698 418 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 TMEM192Q8IY95 271 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 ADGRF4Q8IZF3 695 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 C11orf84Q9BUA3 381 aaPredicted RBP13.17□□□□□ -0.3
MRPL40-203ENST00000471259 AMNQ9BXJ7 453 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 PXMP2Q9NR77 195 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 MICAL3Q7RTP6 2002 aa13.17□□□□□ -0.3
MRPL40-203ENST00000471259 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 H3BQ06 376 aaPredicted RBP13.16□□□□□ -0.3
MRPL40-203ENST00000471259 NOP56O00567 594 aaKnown RBP13.16□□□□□ -0.3
MRPL40-203ENST00000471259 ZNF286BP0CG31 522 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 GOLGA8HP0CJ92 632 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 GNPTABQ3T906 1256 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 CELF3Q5SZQ8 465 aaKnown RBP13.16□□□□□ -0.3
MRPL40-203ENST00000471259 MYSM1Q5VVJ2 828 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.16□□□□□ -0.31e-8■■□□□ 13.6
MRPL40-203ENST00000471259 FIBCD1Q8N539 461 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 USP26Q9BXU7 913 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 IFIH1Q9BYX4 1025 aaKnown RBP13.16□□□□□ -0.3
MRPL40-203ENST00000471259 CLDND1Q9NY35 253 aa13.16□□□□□ -0.3
MRPL40-203ENST00000471259 TRIM6-TRIM34B2RNG4 842 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 H3BRB1 525 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 STAM2O75886 525 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 GGPS1O95749 300 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 MYCLP12524 364 aaPredicted RBP13.15□□□□□ -0.3
MRPL40-203ENST00000471259 CCND2P30279 289 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 HSD17B4P51659 736 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 HAND2P61296 217 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 NHLH1Q02575 133 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 ZP2Q05996 745 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 QRICH1Q2TAL8 776 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 TCEAL5Q5H9L2 206 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 C20orf194Q5TEA3 1177 aa13.15□□□□□ -0.3
MRPL40-203ENST00000471259 TRAF7Q6Q0C0 670 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms