RNA–Protein interactions for RNA: ENST00000471039.1

SCNM1-205, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 618 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-205ENST00000471039 HTATIP2Q9BUP3 242 aa14.17□□□□□ -0.14
SCNM1-205ENST00000471039 SENP6Q9GZR1 1112 aaPredicted RBP14.17□□□□□ -0.14
SCNM1-205ENST00000471039 RTEL1Q9NZ71 1219 aa14.17□□□□□ -0.14
SCNM1-205ENST00000471039 DDX41Q9UJV9 622 aaKnown RBP14.17□□□□□ -0.14
SCNM1-205ENST00000471039 KCNJ14Q9UNX9 436 aa14.17□□□□□ -0.14
SCNM1-205ENST00000471039 UBIAD1Q9Y5Z9 338 aa14.17□□□□□ -0.14
SCNM1-205ENST00000471039 MYH15Q9Y2K3 1946 aa14.17□□□□□ -0.14
SCNM1-205ENST00000471039 ASGR1P07306 291 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 ITGB5P18084 799 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 CPT1AP50416 773 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 FOSBP53539 338 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 KCNA10Q16322 511 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 GNASQ5JWF2 1037 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 GALNT17Q6IS24 598 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 KCNV1Q6PIU1 500 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 BLIDQ8IZY5 108 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 PCSK9Q8NBP7 692 aaKnown RBP14.16□□□□□ -0.14
SCNM1-205ENST00000471039 EMID1Q96A84 441 aaPredicted RBP14.16□□□□□ -0.14
SCNM1-205ENST00000471039 GPRASP2Q96D09 838 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 TMX3Q96JJ7 454 aa14.16□□□□□ -0.14
SCNM1-205ENST00000471039 SPATA31C2B4DYI2 1134 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 GGPS1O95749 300 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 MMP3P08254 477 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 TGFB3P10600 412 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 HMGN5P82970 282 aaKnown RBP14.15□□□□□ -0.14
SCNM1-205ENST00000471039 SP2Q02086 613 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 MTMR1Q13613 665 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 SNX17Q15036 470 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 NLRX1Q86UT6 975 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 FERMT2Q96AC1 680 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 JADE2Q9NQC1 790 aa14.15□□□□□ -0.14
SCNM1-205ENST00000471039 MYH9P35579 1960 aaKnown RBP14.14□□□□□ -0.15
SCNM1-205ENST00000471039 A6NJR5 290 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 SORBS3O60504 671 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 CYP3A4P08684 503 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 KCNA2P16389 499 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 ATN1P54259 1190 aaPredicted RBP14.14□□□□□ -0.15
SCNM1-205ENST00000471039 CELF3Q5SZQ8 465 aaKnown RBP14.14□□□□□ -0.15
SCNM1-205ENST00000471039 AFG1LQ8WV93 481 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 CDHR1Q96JP9 859 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 GLT1D1Q96MS3 346 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 MXRA8Q9BRK3 442 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 STARD7Q9NQZ5 370 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 PDE4DIPQ5VU43 2346 aa14.14□□□□□ -0.15
SCNM1-205ENST00000471039 IGLV3-22A0A075B6J6 115 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 FAM86B1E9PN63 330 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 ZEB2O60315 1214 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 MMP1P03956 469 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 FAM86B2P0C5J1 330 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 RTP1P59025 263 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 PURAQ00577 322 aaKnown RBP14.13□□□□□ -0.15
SCNM1-205ENST00000471039 CEP55Q53EZ4 464 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 MYSM1Q5VVJ2 828 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 CXCL17Q6UXB2 119 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 SLC39A5Q6ZMH5 540 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 NIPA1Q7RTP0 329 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 KRT25Q7Z3Z0 450 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 DHX37Q8IY37 1157 aaKnown RBP14.13□□□□□ -0.15
SCNM1-205ENST00000471039 PPTC7Q8NI37 304 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 OXER1Q8TDS5 423 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 POLR3EQ9NVU0 708 aa14.13□□□□□ -0.15
SCNM1-205ENST00000471039 TRIP12Q14669 1992 aaPredicted RBP14.13□□□□□ -0.15
SCNM1-205ENST00000471039 EDIL3O43854 480 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 MYL3P08590 195 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 HOXD8P13378 290 aaPredicted RBP14.12□□□□□ -0.15
SCNM1-205ENST00000471039 KRT2P35908 639 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 SETQ01105 290 aaPredicted RBP14.12□□□□□ -0.15
SCNM1-205ENST00000471039 LAMC2Q13753 1193 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 TRIM29Q14134 588 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 NEDD9Q14511 834 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 NONOQ15233 471 aaKnown RBP eCLIP14.12□□□□□ -0.15
SCNM1-205ENST00000471039 HSDL1Q3SXM5 330 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 TRIM60Q495X7 471 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 BRDTQ58F21 947 aaPredicted RBP14.12□□□□□ -0.15
SCNM1-205ENST00000471039 C1orf53Q5VUE5 145 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 KRT40Q6A162 431 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 METTL7BQ6UX53 244 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 C7orf61Q8IZ16 206 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 TBCKQ8TEA7 893 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 TNFRSF25Q93038 417 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 SENP7Q9BQF6 1050 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 BCAS3Q9H6U6 928 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 KCNH7Q9NS40 1196 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 PKD2L1Q9P0L9 805 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 ARID2Q68CP9 1835 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 ELP1O95163 1332 aa14.12□□□□□ -0.15
SCNM1-205ENST00000471039 SIP14410 1827 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 A0A0U1RQG5 324 aaPredicted RBP14.11□□□□□ -0.15
SCNM1-205ENST00000471039 CCDC194A0A1B0GVG4 234 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 MEIS1O00470 390 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 ATP9AO75110 1047 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 CABYRO75952 493 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 ZNF286BP0CG31 522 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 ARP10275 920 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 CIITAP33076 1130 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 ZNF76P36508 570 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 GUCY1B3Q02153 619 aa14.11□□□□□ -0.15
SCNM1-205ENST00000471039 NR5A1Q13285 461 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms