RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 PALMO75781 387 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 FTCDO95954 541 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 GUCY2CP25092 1073 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 GUCY2FP51841 1108 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 KCNMA1Q12791 1236 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 SF3B2Q13435 895 aaKnown RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 CALCRLQ16602 461 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 SLC9C1Q4G0N8 1177 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 SPTY2D1Q68D10 685 aaPredicted RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 TXNRD3Q86VQ6 643 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 SUGP1Q8IWZ8 645 aaKnown RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 RNF14Q9UBS8 474 aa14.53□□□□□ -0.08
SFXN3-205ENST00000470252 SAP30BPQ9UHR5 308 aaKnown RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 COL14A1Q05707 1796 aaKnown RBP14.53□□□□□ -0.08
SFXN3-205ENST00000470252 ROBO3Q96MS0 1386 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 ZNF233A6NK53 670 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 NT5C2P49902 561 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 SFMBT2Q5VUG0 894 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 USP17L2Q6R6M4 530 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 CLEC4GQ6UXB4 293 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 REXO1Q8N1G1 1221 aaKnown RBP14.52□□□□□ -0.08
SFXN3-205ENST00000470252 GLIS3Q8NEA6 775 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 TGFBRAP1Q8WUH2 860 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 C8orf37Q96NL8 207 aa14.52□□□□□ -0.08
SFXN3-205ENST00000470252 RBAK-RBAKDNI3L0D1 243 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 RASA1P20936 1047 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 TMEM266Q2M3C6 531 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 FBXW10Q5XX13 1052 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 IQCKQ8N0W5 287 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 RNPC3Q96LT9 517 aaKnown RBP14.52□□□□□ -0.09
SFXN3-205ENST00000470252 KRT12Q99456 494 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 EDEM3Q9BZQ6 932 aa14.52□□□□□ -0.09
SFXN3-205ENST00000470252 POTEMA6NI47 508 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 SERPING1P05155 500 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 LDHBP07195 334 aaKnown RBP14.51□□□□□ -0.09
SFXN3-205ENST00000470252 RNASE9P60153 205 aaKnown RBP14.51□□□□□ -0.09
SFXN3-205ENST00000470252 APBA1Q02410 837 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 CCDC40Q4G0X9 1142 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 KDM7AQ6ZMT4 941 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 RAD54LQ92698 747 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 DDX12PQ92771 950 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 MTMR9Q96QG7 549 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 PIGSQ96S52 555 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 ANKRD2Q9GZV1 360 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 CEP72Q9P209 647 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 GUCY1A3Q02108 690 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 DIXDC1Q155Q3 683 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 FAM83BQ5T0W9 1011 aa14.51□□□□□ -0.09
SFXN3-205ENST00000470252 LSM14BQ9BX40 385 aaKnown RBP14.51□□□□□ -0.09
SFXN3-205ENST00000470252 LUC7LQ9NQ29 371 aaKnown RBP14.51□□□□□ -0.09
SFXN3-205ENST00000470252 PACSIN2Q9UNF0 486 aaPredicted RBP14.51□□□□□ -0.09
SFXN3-205ENST00000470252 CDK5RAP2Q96SN8 1893 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 TRAF5O00463 557 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 SLC37A4O43826 429 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 TLR2O60603 784 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 KIAA0754O94854 1291 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 KLRC1P26715 233 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 LSP1P33241 339 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 POLR2FP61218 127 aaKnown RBP14.5□□□□□ -0.09
SFXN3-205ENST00000470252 NAB2Q15742 525 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 MAPKAPK5Q8IW41 473 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 SNX29Q8TEQ0 813 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 CASKIN2Q8WXE0 1202 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 PIK3R5Q8WYR1 880 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 NUDT12Q9BQG2 462 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.5□□□□□ -0.09
SFXN3-205ENST00000470252 RIC8AQ9NPQ8 531 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 COL4A3BPQ9Y5P4 624 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 NOL4O94818 638 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 NR1D1P20393 614 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 FXR2P51116 673 aaKnown RBP eCLIP14.5□□□□□ -0.09
SFXN3-205ENST00000470252 ARID5AQ03989 594 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 EHHADHQ08426 723 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 PSMD2Q13200 908 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 ORC2Q13416 577 aaPredicted RBP14.5□□□□□ -0.09
SFXN3-205ENST00000470252 ENOX2Q16206 610 aaKnown RBP14.5□□□□□ -0.09
SFXN3-205ENST00000470252 MCTP2Q6DN12 878 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 KCNK18Q7Z418 384 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 MYOCDQ8IZQ8 938 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 TBC1D5Q92609 795 aa14.5□□□□□ -0.09
SFXN3-205ENST00000470252 NUCKS1Q9H1E3 243 aaKnown RBP14.5□□□□□ -0.09
SFXN3-205ENST00000470252 GRID2IPA4D2P6 1211 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 TDP2O95551 362 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 HNRNPH1P31943 449 aaKnown RBP14.49□□□□□ -0.09
SFXN3-205ENST00000470252 KRT79Q5XKE5 535 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 PROM2Q8N271 834 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 MREGQ8N565 214 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 OTUD6BQ8N6M0 293 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 NGLY1Q96IV0 654 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 EYA3Q99504 573 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 RAB34Q9BZG1 259 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 UBA5Q9GZZ9 404 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 ATP6V0A2Q9Y487 856 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 CAPN7Q9Y6W3 813 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 BAG3O95817 575 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 FKBP3Q00688 224 aaKnown RBP14.49□□□□□ -0.09
SFXN3-205ENST00000470252 RAPGEF1Q13905 1077 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 TRADDQ15628 312 aa14.49□□□□□ -0.09
SFXN3-205ENST00000470252 DDB1Q16531 1140 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms