RNA–Protein interactions for RNA: ENST00000470247.1

SREBF1-209, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-209ENST00000470247 UIMC1Q96RL1 719 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 SCAND2PQ9GZW5 306 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 PDGFCQ9NRA1 345 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 FBXO2Q9UK22 296 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-209ENST00000470247 SYNGAP1Q96PV0 1343 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 CEP350Q5VT06 3117 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
SREBF1-209ENST00000470247 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
SREBF1-209ENST00000470247 B4DLN1 442 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 TBX3O15119 743 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 FOXN1O15353 648 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 MAFGO15525 162 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 MCM3APO60318 1980 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 PSMD10O75832 226 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 OR52Z1P0C646 297 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 NCLP19338 710 aaKnown RBP12.75□□□□□ -0.37
SREBF1-209ENST00000470247 HOXD10P28358 340 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 PRPHP41219 470 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 SP2Q02086 613 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 ITGB3BPQ13352 177 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-209ENST00000470247 STK38Q15208 465 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 PRAMEF19Q5SWL8 479 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 TMEM63BQ5T3F8 832 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 ARL6IP4Q66PJ3 421 aaKnown RBP12.75□□□□□ -0.37
SREBF1-209ENST00000470247 CCDC62Q6P9F0 684 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 B3GNT9Q6UX72 402 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 SEPT14Q6ZU15 432 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 EEPD1Q7L9B9 569 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 OTOP1Q7RTM1 612 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 TRIB2Q92519 343 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 SPATA32Q96LK8 384 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 BCAS3Q9H6U6 928 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 AGO4Q9HCK5 861 aaKnown RBP12.75□□□□□ -0.37
SREBF1-209ENST00000470247 PCDHA7Q9UN72 937 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 CEP131Q9UPN4 1083 aa12.75□□□□□ -0.37
SREBF1-209ENST00000470247 SRPRBQ9Y5M8 271 aaKnown RBP12.75□□□□□ -0.37
SREBF1-209ENST00000470247 LRRC37A2A6NM11 1700 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 ELP1O95163 1332 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 LAD1O00515 517 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 ARIH2O95376 493 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 ZNF865P0CJ78 1059 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-209ENST00000470247 KCNA2P16389 499 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 CYP2C19P33261 490 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 SETQ01105 290 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-209ENST00000470247 SPIRE1Q08AE8 756 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 MTMR1Q13613 665 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 CALCRLQ16602 461 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 NLRX1Q86UT6 975 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 FBXO16Q8IX29 292 aaPredicted RBP12.74□□□□□ -0.37
SREBF1-209ENST00000470247 KCNG4Q8TDN1 519 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 CLIC6Q96NY7 704 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 ABHD16BQ9H3Z7 469 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 VTA1Q9NP79 307 aa12.74□□□□□ -0.37
SREBF1-209ENST00000470247 DDX41Q9UJV9 622 aaKnown RBP12.74□□□□□ -0.37
SREBF1-209ENST00000470247 POTEFA5A3E0 1075 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 IPO5O00410 1097 aaKnown RBP12.73□□□□□ -0.37
SREBF1-209ENST00000470247 GADD45BO75293 160 aaPredicted RBP12.73□□□□□ -0.37
SREBF1-209ENST00000470247 HSPA1AP0DMV8 641 aaKnown RBP12.73□□□□□ -0.37
SREBF1-209ENST00000470247 HSPA1BP0DMV9 641 aaKnown RBP12.73□□□□□ -0.37
SREBF1-209ENST00000470247 TXKP42681 527 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 TRIM32Q13049 653 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 ACVR2BQ13705 512 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 GNPTABQ3T906 1256 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 KRI1Q8N9T8 703 aaKnown RBP12.73□□□□□ -0.37
SREBF1-209ENST00000470247 TRPV1Q8NER1 839 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 GBP4Q96PP9 640 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 MPHOSPH6Q99547 160 aaKnown RBP12.73□□□□□ -0.37
SREBF1-209ENST00000470247 ZNF577Q9BSK1 485 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 LMBRD1Q9NUN5 540 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 VAV3Q9UKW4 847 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 TELO2Q9Y4R8 837 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 TRIM17Q9Y577 477 aa12.73□□□□□ -0.37
SREBF1-209ENST00000470247 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-209ENST00000470247 ADCY6O43306 1168 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 TGFB3P10600 412 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 ELNP15502 786 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 PTGS1P23219 599 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 MCM4P33991 863 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 FXR2P51116 673 aaKnown RBP eCLIP12.72□□□□□ -0.37
SREBF1-209ENST00000470247 PRMT2P55345 433 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 ARHGEF6Q15052 776 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 ADALQ6DHV7 355 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 SHC4Q6S5L8 630 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 DTHD1Q6ZMT9 781 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 USP49Q70CQ1 688 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 SLFN12Q8IYM2 578 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 IGSF22Q8N9C0 903 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 ZNF579Q8NAF0 562 aaKnown RBP12.72□□□□□ -0.37
SREBF1-209ENST00000470247 FERMT2Q96AC1 680 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 CDHR1Q96JP9 859 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 RIT2Q99578 217 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 SENP7Q9BQF6 1050 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 CSRNP2Q9H175 543 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
SREBF1-209ENST00000470247 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 PCDHA12Q9UN75 941 aa12.72□□□□□ -0.37
SREBF1-209ENST00000470247 NFASCO94856 1347 aa12.71□□□□□ -0.37
SREBF1-209ENST00000470247 CASP8AP2Q9UKL3 1982 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms