RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 WNT2BQ93097 391 aa9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 RMDN3Q96TC7 470 aa9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 FTOQ9C0B1 505 aaKnown RBP eCLIP9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 ZSCAN16Q9H4T2 348 aaPredicted RBP9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 SLC24A3Q9HC58 644 aa9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 PXMP2Q9NR77 195 aa9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 NOL7Q9UMY1 257 aaKnown RBP9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 ASTN1O14525 1302 aa9.56□□□□□ -0.88
GAPVD1-213ENST00000469498 MYH11P35749 1972 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 DNAJC25-GNG10A0A024R161 153 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 SOWAHBA6NEL2 793 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 SLC15A5A6NIM6 579 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 GPR25O00155 361 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 TDP2O95551 362 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 MYCLP12524 364 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 NCLP19338 710 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 SREBF1P36956 1147 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 PSMC4P43686 418 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 ALDH5A1P51649 535 aaPredicted RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 ARHGAP4P98171 946 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 CAP1Q01518 475 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 CEBPZQ03701 1054 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 DNM1Q05193 864 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 KIF22Q14807 665 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 PGM5Q15124 567 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 LETM2Q2VYF4 491 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 TTC38Q5R3I4 469 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 ARHGEF16Q5VV41 709 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 MCTP2Q6DN12 878 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 NEK8Q86SG6 692 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 FAM133AQ8N9E0 248 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 TNPO1Q92973 898 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 TRIM47Q96LD4 638 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 FGD4Q96M96 766 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 MAP3K20Q9NYL2 800 aaKnown RBP9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 KAT6AQ92794 2004 aa9.55□□□□□ -0.88
GAPVD1-213ENST00000469498 STRNO43815 780 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 FKTNO75072 461 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 COBLO75128 1261 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 CCND2P30279 289 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 TOB1P50616 345 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 RILPL1Q5EBL4 403 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 MORN1Q5T089 497 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 DPP9Q86TI2 863 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 TEX2Q8IWB9 1127 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 ABRAQ8N0Z2 381 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 NPLOC4Q8TAT6 608 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 NSUN6Q8TEA1 469 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 ZNF296Q8WUU4 475 aaPredicted RBP9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 USP28Q96RU2 1077 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 NUDT12Q9BQG2 462 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 PDCD2LQ9BRP1 358 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 SLC4A5Q9BY07 1137 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 WBP1LQ9NX94 342 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 TFIP11Q9UBB9 837 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 ADD3Q9UEY8 706 aaKnown RBP9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 CNPY2Q9Y2B0 182 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 PCDHB6Q9Y5E3 794 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 ATP6V1DQ9Y5K8 247 aa9.54□□□□□ -0.88
GAPVD1-213ENST00000469498 FIBPO43427 364 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 SLC37A4O43826 429 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 EDIL3O43854 480 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 CCNT1O60563 726 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 NR3C2P08235 984 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 CYP2B6P20813 491 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 MCM7P33993 719 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 ZNF76P36508 570 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 RGS2P41220 211 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 PRKCZQ05513 592 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 PDE4DQ08499 809 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 ZNF174Q15697 407 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 ZNF792Q3KQV3 632 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 PCNX4Q63HM2 1172 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 KRI1Q8N9T8 703 aaKnown RBP9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 DNERQ8NFT8 737 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 CRYGNQ8WXF5 182 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 SOCS4Q8WXH5 440 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 ERO1AQ96HE7 468 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 ZNF396Q96N95 335 aaPredicted RBP9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 UIMC1Q96RL1 719 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 APBA2Q99767 749 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 MAF1Q9H063 256 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 GABRQQ9UN88 632 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 CLIC4Q9Y696 253 aa9.53□□□□□ -0.88
GAPVD1-213ENST00000469498 FAM86B1E9PN63 330 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 NEMFO60524 1076 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 CYP3A4P08684 503 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 FAM86B2P0C5J1 330 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 TRAPPC10P48553 1259 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 KRT85P78386 507 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 MRPS9P82933 396 aaKnown RBP9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 SF3A1Q15459 793 aaKnown RBP9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 CCL14Q16627 93 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 PRR16Q569H4 304 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 ANO1Q5XXA6 986 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 TRAF7Q6Q0C0 670 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 ARMCX2Q7L311 632 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 EEPD1Q7L9B9 569 aa9.52□□□□□ -0.89
GAPVD1-213ENST00000469498 TTC13Q8NBP0 860 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms