RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 GDPD2Q9HCC8 539 aa9.27□□□□□ -0.93
NPHP3-204ENST00000469232 PXMP2Q9NR77 195 aa9.27□□□□□ -0.93
NPHP3-204ENST00000469232 PCDHA7Q9UN72 937 aa9.27□□□□□ -0.93
NPHP3-204ENST00000469232 LRRC37A2A6NM11 1700 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 FAM86B1E9PN63 330 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 FIBPO43427 364 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 SLC37A4O43826 429 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 GADD45BO75293 160 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 STAM2O75886 525 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 TDP2O95551 362 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 HOXC6P09630 235 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 FAM86B2P0C5J1 330 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 CMA1P23946 247 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 MAPK4P31152 587 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 GRB14Q14449 540 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 STK38Q15208 465 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 TAF1CQ15572 869 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 ZNF174Q15697 407 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 IL17AQ16552 155 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 LETM2Q2VYF4 491 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 FOXD4L6Q3SYB3 417 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 CEP55Q53EZ4 464 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 B3GNT9Q6UX72 402 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 FOXD4L3Q6VB84 417 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 ANKRD13CQ8N6S4 541 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 IL31RAQ8NI17 732 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 NSUN6Q8TEA1 469 aaKnown RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 HAS1Q92839 578 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 INPP4AQ96PE3 977 aaPredicted RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 ZFYVE28Q9HCC9 887 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 HOMER2Q9NSB8 354 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 HPSEQ9Y251 543 aa9.26□□□□□ -0.93
NPHP3-204ENST00000469232 DIS3Q9Y2L1 958 aaKnown RBP9.26□□□□□ -0.93
NPHP3-204ENST00000469232 SOWAHBA6NEL2 793 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 ARHGAP33O14559 1287 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 NEMFO60524 1076 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 PRPF40AO75400 957 aaKnown RBP9.25□□□□□ -0.93
NPHP3-204ENST00000469232 OR52Z1P0C646 297 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 MCM7P33993 719 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 CRHR2Q13324 411 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 IRF5Q13568 498 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 PLS1Q14651 629 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 PGM5Q15124 567 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 ZNF792Q3KQV3 632 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 MORN1Q5T089 497 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 RESP18Q5W5W9 173 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 NSMFQ6X4W1 530 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 FCHSD1Q86WN1 690 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 NCAPG2Q86XI2 1143 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 IGSF22Q8N9C0 903 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 ZNF454Q8N9F8 522 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
NPHP3-204ENST00000469232 ENGASEQ8NFI3 743 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 FAM20AQ96MK3 541 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 RMDN3Q96TC7 470 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 MXRA8Q9BRK3 442 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 EFCC1Q9HA90 598 aa9.25□□□□□ -0.93
NPHP3-204ENST00000469232 ZNFX1Q9P2E3 1918 aaKnown RBP9.25□□□□□ -0.93
NPHP3-204ENST00000469232 SLC15A5A6NIM6 579 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 MAFGO15525 162 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 SLC26A4O43511 780 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 CCNT1O60563 726 aaKnown RBP9.24□□□□□ -0.93
NPHP3-204ENST00000469232 AOC2O75106 756 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 RGS20O76081 388 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 MBD3O95983 291 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 NR3C2P08235 984 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 FCER1AP12319 257 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 ITGB5P18084 799 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 ICAM3P32942 547 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 VEGFBP49765 207 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 SETQ01105 290 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-204ENST00000469232 SPIRE1Q08AE8 756 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 PDIA5Q14554 519 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 KLHL40Q2TBA0 621 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 SKOR2Q2VWA4 1001 aaPredicted RBP9.24□□□□□ -0.93
NPHP3-204ENST00000469232 SHC4Q6S5L8 630 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 MAMDC4Q6UXC1 1216 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 GPT2Q8TD30 523 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 SLC5A5Q92911 643 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 GPRASP2Q96D09 838 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 JADE2Q9NQC1 790 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 ADD3Q9UEY8 706 aaKnown RBP9.24□□□□□ -0.93
NPHP3-204ENST00000469232 DDX25Q9UHL0 483 aaKnown RBP9.24□□□□□ -0.93
NPHP3-204ENST00000469232 MRVI1Q9Y6F6 885 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 PLXNB2O15031 1838 aa9.24□□□□□ -0.93
NPHP3-204ENST00000469232 PSMD10O75832 226 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 NCLP19338 710 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 MARCKSP29966 332 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CCND2P30279 289 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 LONP1P36776 959 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 ME1P48163 572 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 ALDH5A1P51649 535 aaPredicted RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CNTN2Q02246 1040 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CEBPZQ03701 1054 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 GRIN1Q05586 938 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 GPR142Q7Z601 462 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 PLEKHH3Q7Z736 793 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 ANKRD35Q8N283 1001 aa9.23□□□□□ -0.93
NPHP3-204ENST00000469232 MSL3Q8N5Y2 521 aaKnown RBP9.23□□□□□ -0.93
NPHP3-204ENST00000469232 CYP2W1Q8TAV3 490 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms