RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 KATNAL1Q9BW62 490 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 CNNM2Q9H8M5 875 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 MAP3K20Q9NYL2 800 aaKnown RBP14.26□□□□□ -0.13
COL5A1-207ENST00000469093 COG5Q9UP83 839 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 PCDHA1Q9Y5I3 950 aa14.26□□□□□ -0.13
COL5A1-207ENST00000469093 PALM3A6NDB9 673 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-207ENST00000469093 ZBTB5O15062 677 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 ZNF286BP0CG31 522 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
COL5A1-207ENST00000469093 SP2Q02086 613 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 MBTPS1Q14703 1052 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 HSDL1Q3SXM5 330 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 CELF3Q5SZQ8 465 aaKnown RBP14.25□□□□□ -0.13
COL5A1-207ENST00000469093 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
COL5A1-207ENST00000469093 HLA-CQ95604 372 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 IL25Q9H293 177 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 MAD2L2Q9UI95 211 aa14.25□□□□□ -0.13
COL5A1-207ENST00000469093 BRWD1Q9NSI6 2320 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 SORBS3O60504 671 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 GJB5O95377 273 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 HOXA13P31271 388 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-207ENST00000469093 IKBKEQ14164 716 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 SLC35G1Q2M3R5 365 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 ZNF618Q5T7W0 954 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 KCNV1Q6PIU1 500 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 CYB5R4Q7L1T6 521 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 SAMD3Q8N6K7 520 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 ZFP91Q96JP5 570 aaPredicted RBP14.24□□□□□ -0.13
COL5A1-207ENST00000469093 SPATA33Q96N06 139 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 RAD9AQ99638 391 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 C16orf70Q9BSU1 422 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 SUGCTQ9HAC7 445 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 LMCD1Q9NZU5 365 aa14.24□□□□□ -0.13
COL5A1-207ENST00000469093 KIAA1217Q5T5P2 1943 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 TGFB3P10600 412 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 ERVK-21P61565 698 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 PGM5Q15124 567 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 IL31RAQ8NI17 732 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 RIOX1Q9H6W3 641 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 TANC1Q9C0D5 1861 aa14.23□□□□□ -0.13
COL5A1-207ENST00000469093 TRANK1O15050 2925 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 LINC01553A4QN01 128 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 EFCAB14O75071 495 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 LGR5O75473 907 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 GGPS1O95749 300 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 FAM117BQ6P1L5 589 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.22□□□□□ -0.13
COL5A1-207ENST00000469093 SERINC5Q86VE9 423 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.13
COL5A1-207ENST00000469093 TGS1Q96RS0 853 aaKnown RBP14.22□□□□□ -0.13
COL5A1-207ENST00000469093 PIGSQ96S52 555 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 C1QTNF1Q9BXJ1 281 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 EPHX3Q9H6B9 360 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 BCAS3Q9H6U6 928 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 MTUS1Q9ULD2 1270 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 REV3LO60673 3130 aa14.22□□□□□ -0.13
COL5A1-207ENST00000469093 BAZ2BQ9UIF8 2168 aaKnown RBP14.22□□□□□ -0.13
COL5A1-207ENST00000469093 GCOM1H8Y6P7 765 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-207ENST00000469093 CYTH3O43739 400 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 POLR2MP0CAP2 368 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 UBA1P22314 1058 aaKnown RBP14.21□□□□□ -0.13
COL5A1-207ENST00000469093 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
COL5A1-207ENST00000469093 GRM4Q14833 912 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 FCHSD1Q86WN1 690 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 HOMER1Q86YM7 354 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 DBF4BQ8NFT6 615 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 EXOC6Q8TAG9 804 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 GDPD5Q8WTR4 605 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 MLXIPQ9HAP2 919 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 SENP2Q9HC62 589 aa14.21□□□□□ -0.13
COL5A1-207ENST00000469093 MYH7BA7E2Y1 1941 aa14.21□□□□□ -0.14
COL5A1-207ENST00000469093 MYH6P13533 1939 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 PTPRSQ13332 1948 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 RSPH10B2B2RC85 870 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 H3BRB1 525 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 CYP21A2P08686 494 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 RSPH10BP0C881 870 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 CCND2P30279 289 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 THPOP40225 353 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 TRDNQ13061 729 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 TRAF1Q13077 416 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 TUT1Q9H6E5 874 aaKnown RBP14.2□□□□□ -0.14
COL5A1-207ENST00000469093 INSL6Q9Y581 213 aa14.2□□□□□ -0.14
COL5A1-207ENST00000469093 EMSYQ7Z589 1322 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 XIRP2A4UGR9 3374 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-207ENST00000469093 PNMA6FA0A0J9YX94 578 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 C17orf102A2RUQ5 167 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 IFIT3O14879 490 aaKnown RBP14.19□□□□□ -0.14
COL5A1-207ENST00000469093 TREHO43280 583 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 HOXC8P31273 242 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 MRPS9P82933 396 aaKnown RBP14.19□□□□□ -0.14
COL5A1-207ENST00000469093 PTH1RQ03431 593 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 TROAPQ12815 778 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 PLEKHG4Q58EX7 1191 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 ATP6V0A1Q93050 837 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 RNPEPQ9H4A4 650 aa14.19□□□□□ -0.14
COL5A1-207ENST00000469093 U3KPZ7 1027 aaPredicted RBP14.19□□□□□ -0.14
COL5A1-207ENST00000469093 LAMA4Q16363 1823 aa14.18□□□□□ -0.14
COL5A1-207ENST00000469093 SPATA31C2B4DYI2 1134 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms