RNA–Protein interactions for RNA: ENST00000468421.1

MSX1-202, Transcript of msh homeobox 1, humanhuman

TSL 3

Gene MSX1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-202ENST00000468421 SLC5A5Q92911 643 aa12.14□□□□□ -0.47
MSX1-202ENST00000468421 MMTAG2Q9BU76 263 aaKnown RBP12.14□□□□□ -0.47
MSX1-202ENST00000468421 GZF1Q9H116 711 aaPredicted RBP12.14□□□□□ -0.47
MSX1-202ENST00000468421 TTC12Q9H892 705 aaPredicted RBP12.14□□□□□ -0.47
MSX1-202ENST00000468421 DDX19AQ9NUU7 478 aaKnown RBP12.14□□□□□ -0.47
MSX1-202ENST00000468421 FAM13BQ9NYF5 915 aa12.14□□□□□ -0.47
MSX1-202ENST00000468421 MARCH6O60337 910 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 PSMD10O75832 226 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 ZNF202O95125 648 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 MAPK4P31152 587 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 SYKP43405 635 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 SPIRE1Q08AE8 756 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 GRB14Q14449 540 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 TMEM266Q2M3C6 531 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 ZNF792Q3KQV3 632 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 XRRA1Q6P2D8 792 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 PLEKHH3Q7Z736 793 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 SLFN12Q8IYM2 578 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 PDILTQ8N807 584 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 FAM20AQ96MK3 541 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 INPP4AQ96PE3 977 aaPredicted RBP12.13□□□□□ -0.47
MSX1-202ENST00000468421 IWS1Q96ST2 819 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 PANK2Q9BZ23 570 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 CCSER1Q9C0I3 900 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 CLSTN2Q9H4D0 955 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 KCNH7Q9NS40 1196 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 PKD2L1Q9P0L9 805 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 ADD3Q9UEY8 706 aaKnown RBP12.13□□□□□ -0.47
MSX1-202ENST00000468421 VAV3Q9UKW4 847 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 KCNH3Q9ULD8 1083 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 PCDHA12Q9UN75 941 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
MSX1-202ENST00000468421 STRNO43815 780 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 ALDH1A1P00352 501 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 CTGFP29279 349 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 ITGB3BPQ13352 177 aaPredicted RBP12.12□□□□□ -0.47
MSX1-202ENST00000468421 MTMR1Q13613 665 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 KARSQ15046 597 aaKnown RBP12.12□□□□□ -0.47
MSX1-202ENST00000468421 CAMK4Q16566 473 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 CCDC183Q5T5S1 534 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 LRCH2Q5VUJ6 765 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 CABP7Q86V35 215 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 ABRAQ8N0Z2 381 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 LRRC15Q8TF66 581 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 GPRASP2Q96D09 838 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 AK8Q96MA6 479 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 NUDT12Q9BQG2 462 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 ZNF577Q9BSK1 485 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 NUP62CLQ9H1M0 184 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
MSX1-202ENST00000468421 LRWD1Q9UFC0 647 aa12.12□□□□□ -0.47
MSX1-202ENST00000468421 SLC15A5A6NIM6 579 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 IPO5O00410 1097 aaKnown RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 POLR2DO15514 142 aaKnown RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 DHX15O43143 795 aaKnown RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 ACTN4O43707 911 aaKnown RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 KINO60870 393 aaKnown RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 ATP9AO75110 1047 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 STAM2O75886 525 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 PDE4DQ08499 809 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 PDIA5Q14554 519 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 STXBP2Q15833 593 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 E2F4Q16254 413 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 ZSCAN23Q3MJ62 389 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 LONRF3Q496Y0 759 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 MORN1Q5T089 497 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 NCAPH2Q6IBW4 605 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 B3GNT9Q6UX72 402 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 REM2Q8IYK8 340 aaPredicted RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 NPLOC4Q8TAT6 608 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 MORC4Q8TE76 937 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 SYAP1Q96A49 352 aaPredicted RBP12.11□□□□□ -0.47
MSX1-202ENST00000468421 DHX58Q96C10 678 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 SERTAD1Q9UHV2 236 aa12.11□□□□□ -0.47
MSX1-202ENST00000468421 LOXHD1Q8IVV2 1947 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 DDX39AO00148 427 aaKnown RBP12.1□□□□□ -0.47
MSX1-202ENST00000468421 EML1O00423 815 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 GAS7O60861 476 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 KCNA2P16389 499 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 MAP2K2P36507 400 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 TXLNAP40222 546 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 UBA7P41226 1012 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 GRB10Q13322 594 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 PPP2R5CQ13362 524 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 ECM1Q16610 540 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 KRBA2Q6ZNG9 492 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 OTOP1Q7RTM1 612 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 NLRX1Q86UT6 975 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 SNX29Q8TEQ0 813 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 PNMA5Q96PV4 448 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 PLIN2Q99541 437 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 RIT2Q99578 217 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 TEKT3Q9BXF9 490 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 RAB34Q9BZG1 259 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 ARHGAP39Q9C0H5 1083 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 UNC45AQ9H3U1 944 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 DISC1Q9NRI5 854 aa12.1□□□□□ -0.47
MSX1-202ENST00000468421 ARID2Q68CP9 1835 aa12.09□□□□□ -0.47
MSX1-202ENST00000468421 CASP8AP2Q9UKL3 1982 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms